Streptomyces gobiensis: test1122_12425
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Entry
test1122_12425 CDS
T08145
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgob
Streptomyces gobiensis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgob03021
]
test1122_12425
Transcription machinery [BR:
sgob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
test1122_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
MarR
MarR_2
HTH_3
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UGY92447
LinkDB
All DBs
Position
2683877..2684761
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AA seq
294 aa
AA seq
DB search
MSVELGSSKVLTDVIKTDAPHSDSGDPGLTELSRLPADCDAIDTRTLSRSLFLRLAALDK
DSPERTYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEF
PTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDDLAQKLDRSPTVPELAACL
GVSEEDVVDGLAVGNAYTASSLDSPSLEEDGNEGSLADRLGYEDSALEGVEYRESLKPLL
AKLPARERQIIMLRFFGNMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLIAEE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgctcaccgacgtgatcaagaccgacgcaccg
cacagcgactcaggggatcccgggctcaccgagctctccaggcttcccgcagactgcgac
gccatcgacacccgcaccctctcccgctccctcttcctgcggctagccgcactcgacaag
gacagtccggagcgcacatatgtccgggacacgctcattgagctcaatctcccgcttgtg
cgctacgcggctgcccgcttccgcagtcgcaacgagccgatggaggacatcgtccaagtc
ggcaccattggtctgatcaaggcgatcgaccggttcgactgtgaacgtggcgtggagttc
ccgaccttcgcgatgccgacggtagtcggcgagatcaagcggttcttccgggacacctct
tggtccgtgcgggtgccccgcaggctccaggagctacggctggcactcaccaaggccagt
gatgacctcgctcagaaacttgaccgatcaccgaccgtacccgaactcgccgcctgcctc
ggagtgtccgaggaggacgtcgtcgacgggctggccgtgggaaacgcctacaccgccagc
tcgctcgactcaccctcgctggaggaggacggcaacgagggctccctggccgaccggctc
ggctatgaagacagcgcgctggagggcgtggagtaccgcgagtcgctgaagccactgctg
gccaaactgcccgcgcgcgagcggcagatcatcatgttgcgcttcttcggcaatatgacc
cagtcgcagatcggggaggaggtcggcatctcccagatgcatgtctcgcgactgctcacc
cgcaccctggcacagctacgggagggccttatcgcagaggagtga
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