Streptomyces gobiensis: test1122_13645
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Entry
test1122_13645 CDS
T08145
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
test1122_13645 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgob01007
]
test1122_13645 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgob03016
]
test1122_13645 (aspS)
03029 Mitochondrial biogenesis [BR:
sgob03029
]
test1122_13645 (aspS)
Enzymes [BR:
sgob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
test1122_13645 (aspS)
Amino acid related enzymes [BR:
sgob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
test1122_13645 (aspS)
Transfer RNA biogenesis [BR:
sgob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
test1122_13645 (aspS)
Prokaryotic type
Other AARSs
test1122_13645 (aspS)
Mitochondrial biogenesis [BR:
sgob03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
test1122_13645 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UGY92660
LinkDB
All DBs
Position
complement(2941234..2943021)
Genome browser
AA seq
595 aa
AA seq
DB search
MHRYRSHNCGELRASDVDADVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTAANE
ALSHLTKETVVRIDGKVVNRGADNINPELPTGEIEVEVSEVEVLGTADQVPFTINTEDGV
NEEKRLEYRFLDLRRERMHRNILLRTAVISAIRQKMTTLGFNEMATPILSATSPEGARDF
LVPSRLHPGNFYALPQAPQQFKQLLMIAGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQVIETVMTELFQEFGGGREVTSPFVRIPFREAMVKYGTDKPDLRAQLELV
DVSDVFAGSGFNAFADKHVRAMAVPDTADRPRKFFDQLGDFAIQQGAKGLAWVRVGDDNA
LTGPIAKFLTDENISALLTTLNAKPGTSIFFGAGEFDEVSKIMSAVRVEAAKRAGHFEEN
VFRFCWIVDFPMYEKDEDTGKIEFSHNPFSMPQGGLEALETQDPLDVLAWQYDIVCNGVE
LSSGAIRNHEPEIMYKAFEIAGYTKETVEQEFGGMLRAFKFGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLLMGAPSEVDDARLKELHLSISKAPSPQLRFKPTK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtaccggtcccacaactgcggcgagcttcgcgcttccgacgtcgacgccgac
gtccggctcagcggctggctgcacaatcggcgcgacctgggcggcatcctcttcatcgat
ctccgtgaccactatggcctggtccagctggtcgcgcgccccggcaccgccgcgaacgag
gcgctgagccacctcaccaaggagaccgtggtccggatcgacggcaaggtcgtcaaccgg
ggcgccgacaacatcaaccccgagctgccgaccggcgagatcgaggtcgaggtcagcgag
gtggaggtgctgggcaccgccgaccaggtccccttcacgatcaacaccgaggacggcgtc
aatgaggagaagcggcttgagtaccgcttcctcgatctgcgccgcgagcggatgcaccgc
aacatcctgctgcgtacggccgtcatctccgccatccggcagaagatgaccaccctgggc
ttcaacgagatggcgaccccgattctgtccgccacctcccccgagggcgcgcgcgacttc
ctggtgccgtcccggctgcacccgggcaacttctacgcgcttccgcaggccccccagcag
ttcaagcagctgctgatgatcgcgggctttgaccgttacttccagatcgcgccctgcttc
cgtgacgaggacgcccgcgccgaccgctcaccgggcgagttctaccagctcgatgtcgag
atgagctttgtcgagcaggaggatgtcttccaggtcatcgagacggtgatgaccgagctc
ttccaggagttcggcggcggccgcgaggtcacctcgccgttcgtccgtattccgttccgc
gaggcgatggtcaagtacggcaccgacaagccggacctgcgtgctcagctggagctggtg
gatgtctcggatgtcttcgcggggtcgggcttcaatgccttcgccgacaagcatgtacgg
gccatggccgtgccggacaccgcggaccggccgcggaagttcttcgaccagctgggggac
ttcgcgatccagcagggtgccaagggcctggcctgggtgcgggtcggtgacgacaacgcg
ctgaccggcccgatcgccaagttcctcaccgatgagaacatctcggcactcctcaccacg
ctgaacgccaagccgggcacgtccatcttcttcggcgccggtgagttcgacgaggtctcc
aagatcatgagcgccgtccgggtcgaggcggccaagcgcgccgggcacttcgaggagaac
gtcttccggttctgctggatcgtggacttcccgatgtacgagaaggacgaggacaccggc
aagatcgagttctcccacaaccccttctcgatgccgcagggcggtctggaggccctggag
acccaggacccgctggacgtcctcgcctggcagtacgacatcgtctgcaacggcgttgag
ctctcctccggcgccatccgtaaccatgagccggagatcatgtacaaggccttcgagatc
gccggttacaccaaggagaccgtggagcaggagttcggcggcatgctccgcgccttcaag
ttcggcgccccgccgcacggcggcatcgccccgggcgtggaccgtatcgtcatgctgctg
gcggacgagcccaacatccgcgagacgatcgcgttcccgctgaacggcaacgcgcaggac
ctgctgatgggcgcacccagcgaggtcgacgacgcccgcctgaaggaactccacctcagc
atcagcaaggccccctcgccccagctccgcttcaagcccacgaagtag
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