Streptomyces gobiensis: test1122_18495
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Entry
test1122_18495 CDS
T08145
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03420
Nucleotide excision repair
sgob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
test1122_18495
03430 Mismatch repair
test1122_18495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_18495
Enzymes [BR:
sgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
test1122_18495
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
test1122_18495
MMR (mismatch excision repair)
Other MMR factors
test1122_18495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Zn_ribbon_TiaS
HHH_5
Zn_Ribbon_TF
C1_1
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UGY95210
LinkDB
All DBs
Position
complement(3945770..3947956)
Genome browser
AA seq
728 aa
AA seq
DB search
MPDSADAVLDGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILPPASVL
AVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGELPRLLERKVALV
NEAAARSRIRLDRSELRDVTGEIEWSKVTQTVPEDYPAAVVKAGRDAPRDPAEIAGIYAT
YEQLKRDRATIDFEDVLLLTVGILQDRHDIAEQVRQQYQHFVVDEYQDVSPLQQRLLDLW
LGDRDSLCVVGDASQTIYSFTGATPDHLLNFRTRHPDATLVKLIRDYRSTPQVVHLANGL
LSQARGRAAEHRLELVSQRDAGPEPVYAEYADEPAEAEGTARRIRELINSGVAASEIAVL
YRINAQTEVYEQALADAGVPYQLRGAERFFERPEVREAAVALRGAARAGGNDALLDDAVD
LPSQVRAVLGTKGWQSQAPAGSGAVRDRWESLAALARLAEDFARARPRATLADLVAELDE
RVSAQHAPAVDGVTLASLHSAKGLEWDAVFLVGLTEGMMPITYAKTDEQVEEERRLLYVG
VTRARFHLALSWALARSPGGRAGRRPSRFLNGLRPGSAAVGARTAGGSGGVERGSGGRSR
KQRGPVKCRVCGRTLTDAGEMKLMRCEGCPSDLDEELYERLREWRSEQASQLGQPAYCVF
TDKTLMAIAEAVPDNEAELTRIPGVGTRKLQRFGADVLALCAGEELVDQEEEGTPVPVTQ
VVTNQGQK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgccagactccgccgacgcggtgctcgacgggcttgaccccgagcaacgcgaggtggcg
acggccctgcacggaccggtgtgtgtgctggccggggccggtacgggcaagacccgggcg
attacccaccggatcgcctacggggttcgggcagggatattgccgcccgcgagtgtgctt
gccgtcacattcaccaaccgtgcggcaggtgagatgcgcgggcggctgcgccagctgggc
gcgggcggtgtccaggcgcgtaccttccactccgccgcgctgcgccagcttcagtacttc
tggcccaaggcggtcggcggtgagctgccccggctgctggagcgcaaggtggcgctggtc
aacgaggccgcggcccggtcccggatcaggctcgaccgcagcgagctgcgggatgtcacc
ggtgagatcgagtggtccaaggtcacccagaccgtgcccgaggactatccggccgcggtg
gtgaaagcaggtcgggacgccccccgcgaccccgccgagatcgccgggatctacgccacc
tatgaacagctcaagcgggaccgcgcgacgatcgattttgaggatgtactgctgctgacc
gtcggcatcctgcaggaccggcacgacatcgccgagcaggtgcggcagcagtaccagcac
tttgtcgtggatgagtaccaggatgtcagcccgctccagcagcggctgctggacctgtgg
ctcggcgaccgggacagcctctgtgttgtcggggacgccagccagacgatctactccttc
accggagcgaccccggaccacctgctgaacttccgcacccgccacccggacgcgaccctg
gtgaagctgatccgcgactaccgctccacgccgcaggtggtgcaccttgccaatggtctg
ctctcgcaggcccgtggccgggccgccgagcaccggctggagctggtgtcgcagcgcgac
gcgggtccggagccggtctacgccgagtacgccgatgagccagccgaggccgagggcacc
gcgcggcggatccgggagctgatcaactccggcgtcgccgcgagcgagatcgcggtgctc
tatcgcatcaacgcacagaccgaggtctatgagcaggcgctcgccgacgccggggtgccc
taccagctgcgcggggccgagcgcttctttgaacggcccgaggtgcgtgaggccgcggtc
gcgctgcgtggcgccgcaagggcgggtggcaacgatgcgctgctggacgacgccgtcgat
ctgccctcgcaggtgcgtgcggtccttggcaccaagggctggcagtctcaggccccggcc
ggttcgggcgcggtccgcgaccgctgggagtccctggcggcgctggcccggctcgctgag
gacttcgcccgggccaggccgcgtgcgacgctcgccgatctcgtcgccgagcttgacgag
cgggtcagcgcccagcacgctcccgccgtcgatggggtcactctcgcctcgctgcactcg
gcgaagggcctggagtgggacgcggtgttcctggtcggcctcaccgagggcatgatgccg
atcacttacgccaagacggatgagcaggtcgaggaggaacggcggctgctctatgtcggg
gtcacccgggcccggttccatctcgccctctcctgggcgctggcccgttcgcccggcggc
cgggcggggcgtcgcccaagccgctttctgaacggactgcggcccggctcagcggccgtc
ggcgcacgtacggccggtggcagcggcggtgttgagcggggcagcggcggacgctcacgt
aagcagcgcgggccggtgaagtgccgggtctgcgggcggactctgaccgacgcgggtgag
atgaagctgatgcggtgtgagggctgcccctccgacctcgacgaggagctgtatgaacgg
ctgcgtgagtggcgctcggagcaagccagtcagctggggcagcccgcctactgcgtcttc
accgacaaaaccctgatggccatcgctgaggcggtgccggacaacgaggccgagctgacc
cggattcccggcgtggggacccgtaagctccagcggttcggcgccgatgtactggcgctc
tgcgcaggtgaggagcttgtggaccaagaggaagagggaactccagtacctgtcacacag
gttgttacgaaccaagggcaaaaatag
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