Streptomyces gobiensis: test1122_19270
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Entry
test1122_19270 CDS
T08145
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob00300
Lysine biosynthesis
sgob00470
D-Amino acid metabolism
sgob01100
Metabolic pathways
sgob01110
Biosynthesis of secondary metabolites
sgob01120
Microbial metabolism in diverse environments
sgob01230
Biosynthesis of amino acids
Module
sgob_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
test1122_19270 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
test1122_19270 (lysA)
Enzymes [BR:
sgob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
test1122_19270 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UGY93645
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All DBs
Position
4096117..4097508
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYTAPPADLNALDPRVWARTVVRDDDGVVSVGGLTVRELAE
EFGTPAYILDEDDFRSRCRAWREAFGADADVFYAGKAFLSLAVVRWLHEEGLNLDVCSGG
ELATALAAGMPAERIALHGNNKSNEEIQRAVEAGIGRIVLDSFQEIARVAHIAQRLGKRQ
PVLIRVTVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEAVRRVLRHESLELTGIHSHIGS
QIFDTSGFEVAAHRVVGLLREIRDEHGAELPEIDLGGGLGIAYTPEDDPREPHEIAKSLG
EIVTRECESAGLSVPRLSVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYLSVDGGMSDNIR
TALYDAEYTVSLVSRASEAEPMLSRVVGKHCESGDIVVRDAFLPADTAPGDLLAVPATGA
YCRSMASNYNHALRPPVVAVKDGVARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgtcacgccgatgtgctgcccgaggggcat
tacacagcgccgcccgccgatctcaacgccctggatccacgcgtctgggcccgtacggtc
gtacgcgacgacgacggcgtcgtcagcgtcggcggcctgaccgtcagagaactcgccgag
gagttcggcaccccggcctacatcctggacgaggacgacttccgttcccggtgccgggcc
tggcgcgaggccttcggcgcggacgcggatgtgttctacgccgggaaggccttcctctcc
ctcgccgtcgtccgctggctgcatgaggaaggcctcaacctggatgtctgctccggcggt
gagctggccaccgcgctggcggccggaatgcccgccgagcggatcgccctgcacggcaac
aacaagagcaatgaggagatccagcgggccgtggaggccgggatcggccggatcgtcctc
gactccttccaggagatcgcccgggtcgcccatatcgcccagcgactgggcaagcgccag
ccggtactgatccgggtcacggtgggcgtcgaggcgcacacccatgagttcatcgccacc
gcccacgaggaccagaagttcggcctgccgctcgcgggcgggcaggccgccgaggccgta
cgccgggtgctgcggcacgagtcgctggagctgaccggcatccactcacacatcggctcc
cagatcttcgacacctccggcttcgaggtggccgctcaccgggtcgtcgggctgctgcgg
gagatccgcgatgagcacggtgccgagctgccggagatcgacctcggcggtggcctgggc
atcgcgtacacccccgaggacgacccacgggagccgcacgagatcgcgaagtcgctcggt
gagatcgtcacccgtgagtgtgagtccgccggcctctcggtgccccggctctcggtggaa
ccgggccgggcgatcgttggaccgaccgccttcaccctctacgaggtcggcaccgtcaag
ccgctggaggggctgcggacatacctcagcgtcgatggcgggatgtccgacaacatccgt
accgcgctctatgacgcggagtacacggtctccctggtgtcccgtgcctccgaggccgaa
ccgatgctgagccgggtggtgggcaagcactgcgaaagcggagatatcgtcgtgcgtgac
gctttcctccccgccgatacggctccgggtgacctactcgcggtgcccgctaccggcgcg
tactgccgctcgatggccagcaactacaaccacgcgctgcgcccgcccgtcgtcgcggtc
aaggacggcgtggcccgggtgatcgtccgccgtgagacggaggaggatctgctgcggctg
gatgtcgggtaa
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