Streptomyces gobiensis: test1122_20310
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Entry
test1122_20310 CDS
T08145
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob02024
Quorum sensing
sgob03060
Protein export
sgob03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
test1122_20310 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
test1122_20310 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
test1122_20310 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sgob02044
]
test1122_20310 (ffh)
Enzymes [BR:
sgob01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
test1122_20310 (ffh)
Secretion system [BR:
sgob02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
test1122_20310 (ffh)
Eukaryotic Sec-SRP protein
test1122_20310 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
nSTAND3
CLP1_P
APS_kinase
Zeta_toxin
NPHP3_N
MMR_HSR1
AAA_24
AAA_26
AAA_30
AAA_16
AAA_18
ArsA_ATPase
AAA_33
MobB
Catalase_C
AAA_17
ATP_bind_1
AAA
6PF2K
TctA
TsaE
MeaB
Thymidylate_kin
NACHT
Motif
Other DBs
NCBI-ProteinID:
UGY93825
LinkDB
All DBs
Position
4343224..4344783
Genome browser
AA seq
519 aa
AA seq
DB search
MFDTLSDRLASTFKTLRGKGRLSEADIDATAREIRVALLEADVALPVVRSFIAQVKSRAL
GAEVSKALNPAQQVIKIVNEELVGILGGETRQLRFAKQPPTVIMLAGLQGSGKTTLAGKL
GHWLKSKGHTPVLVACDLQRPNAVNQLAIVAERADVGIFAPEPGNGVGDPIQVAKDSMEY
ARTKQHDVVIVDTAGRLGIDQEMMQQAADIRDAVSPDEVLFVVDAMTGQDAVNTAEAFRD
GVGFDGVVLSKLDGDARGGAALSVAQITGRQVMFASNGEKLDDFDAFHPDRMASRILGMG
DVLSLIEKAEQTFSQQEAEKMAAKLAKGPKEFTLDDFLAQMEQVRKMGSISKLLGMMPGM
GQMKDQIQNLDEREVDRTAAMIKSMTPAERDNPTIINGSRRARIARGSGMDVSAVKNLVE
RFFEARKMMSKMAQGGGMPGMPGMPGMGGGAAKKKAKQQKKAKGKRRSGNPMKRQQEEQA
AADRKAAGAGSAFGLPGAGNDPSSFELPEEFKDMLPPKS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgatactctctccgaccgcttggcgagcactttcaagaccctccggggcaaaggg
cgactgtccgaggcggacatcgacgccacggcgcgtgagatccgtgtcgcgctgctcgaa
gcggacgttgcgctgcccgtcgtccgttccttcatcgcgcaggtcaagtcgagggccctc
ggcgccgaggtttccaaggccctcaacccggcccagcaggtcatcaagatcgtcaacgag
gagctggttggcatcctcggcggcgagacccgccagctgcgcttcgccaagcagccgccg
accgtcatcatgctcgccggtctgcagggttccggtaagaccaccctcgcgggcaagctg
ggccactggctgaagagcaaggggcacaccccggtactggtggcctgtgacctccagcgc
cccaacgcggtgaaccagctcgccatcgtcgccgagcgcgcggacgtggggattttcgcc
ccggagccgggcaacggcgtcggcgacccgatccaggtcgccaaggactcgatggagtac
gccaggaccaagcagcacgatgtggtcatcgttgacaccgccggccgcctcggtatcgac
caggagatgatgcagcaggcagccgacatccgggacgccgtcagtccggacgaggtgctg
tttgtcgtcgacgcgatgaccggtcaggacgccgtcaatacggccgaggccttccgggac
ggcgtcggcttcgacggcgtggtgctctccaagctcgacggcgacgcccgtggtggtgcc
gcgctctccgtcgcacagatcaccggccggcaggtcatgttcgcctccaatggcgagaag
ctggacgacttcgacgccttccacccggaccggatggcgtcccgcattctcggcatgggc
gatgtgctcagcctcatcgagaaggccgagcagaccttcagccagcaagaggccgagaag
atggccgccaagctggccaaggggcccaaggagttcacgctcgacgacttcctggcgcag
atggagcaggtccgcaagatgggctccatctccaaactgctcggcatgatgccgggcatg
ggccagatgaaggaccagatccagaatctggacgagcgcgaggtcgaccgcaccgccgcg
atgatcaagtcaatgaccccggccgagcgggacaaccccaccatcatcaacggctcccgc
cgggcccgtatcgcccgtggttcgggcatggacgtcagcgccgtcaagaacctggtggag
cgcttcttcgaggcccgcaagatgatgtcgaagatggctcagggcggcggtatgccgggc
atgcccgggatgccgggtatggggggcggcgccgccaagaagaaggccaagcagcagaag
aaggccaagggcaagcgccgctcgggtaacccgatgaagcgccagcaggaggagcaggcc
gccgccgaccgcaaggccgcaggcgcgggcagcgccttcggactgccgggcgcgggcaac
gacccgagctccttcgaactccccgaagaattcaaggacatgctccccccaaagagctaa
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