Streptomyces gobiensis: test1122_20395
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Entry
test1122_20395 CDS
T08145
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sgob
Streptomyces gobiensis
Pathway
sgob02020
Two-component system
sgob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
test1122_20395 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
test1122_20395 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgob03021
]
test1122_20395 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sgob02035
]
test1122_20395 (whiG)
Transcription machinery [BR:
sgob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
test1122_20395 (whiG)
Bacterial motility proteins [BR:
sgob02035
]
Flagellar system
Flagellar assembly proteins
Stator
test1122_20395 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
UPF0122
CENP-B_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UGY93841
LinkDB
All DBs
Position
4359083..4359925
Genome browser
AA seq
280 aa
AA seq
DB search
MPHHMSGSQRTATAVPPAADAAARPAAPSSLEELWRLYKDTGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDPGRSIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARAVERAYATLEASLRRTPSEAEVAAEMGIQLEELHAVFSQLSLANVVAL
EELLHVGGESGDRLSLMDTLEDTAAENPVEIAEDRELRRLLARAINTLPEREKTVVTLYY
YEGLTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccacatgtccgggtcccaacgcacggccacagcggtgccgcccgcggccgac
gcggctgcgcgccccgccgcccccagttcgctggaagagctgtggcggttgtacaaggac
acgggtgacgagcggctgcgggagcagctgatcctgcactactcaccactggtgaagtac
gtggccggacgggtcagtgtggggctgccgcccaatgtggagcaggccgactttgtctcc
tcgggagtcttcgggctcatcgacgcgatcgagaagttcgaccccgggcggtccatcaag
ttcgagacctacgccatcacccgcatccgcggggcgatgatcgatgaactgcgggcactg
gactggatcccgcgttcggtccggcagaaggcccgcgcggtggagcgggcctacgccacg
ctggaggcctcgctgcggcgtacgccctcggaggctgaggtggccgccgagatgggcatc
cagctggaggaactgcacgctgtcttcagtcagttgtcgctggccaatgtggtggcgctg
gaggagctgctgcacgtcggcggtgagagcggcgaccggctgagcctgatggatacgctg
gaggacaccgccgccgagaacccggtcgagatcgccgaggaccgtgagctgcggcgactg
ctggccagggcgatcaacacactgccggagcgggaaaagaccgtggtcaccctctactac
tacgagggccttacgctcgccgagatcggccaggtgctgggggtcacagagagccgggtg
agccagatccacaccaagtccgtgctgcaattgcgcgcgaagctcgcggatgtgggtcgc
tga
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integrated database retrieval system
