Streptomyces gobiensis: test1122_21110
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Entry
test1122_21110 CDS
T08145
Name
(GenBank) HAMP domain-containing protein
Organism
sgob
Streptomyces gobiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
Nup49_C
ATG14
Motif
Other DBs
NCBI-ProteinID:
UGY93962
LinkDB
All DBs
Position
4517464..4522953
Genome browser
AA seq
1829 aa
AA seq
DB search
MESGGAARGASTRAKGGRSRKSGTIEVDAAALDRLRTALVAMRDGNFRKRLTVAGEGPMA
EVSAIFNEVADRNLHLTNELARVRRVVGRDGKLTERLEAGACEGSWAAAIDASNALVDDL
VRPVSEVGRVLTAVAEGDLEQRMELRAEGANGSVHPLRGEFLKVGRTVNGLVDQLSVFTD
EVTRVASEVGTEGKLGGQAKVRGMSGSWKDLTDSVNTMASRLTAQVRDIALVTTAVAKGD
LSRKVTVHVAGEMLELKNTVNTMVDQLSSFQSEVTRVAREVGTEGELGGQARVQGVAGVW
QDLTDSVNTMAGNLTSQVREIAQVTTAVANGDLSQKVTVNARGEVAQLADTINTMTETLR
TFADEVTRAASEVGTEGVLGGQAQVPGAAGIWKDLTDSVNAAFRNLTAQVRDIAQVTTAV
ANGDLSQKVTVDVSGEMLELKNTVNTMVDQLSSFGAEVTRVAREVGVEGELGGQAQVPGA
AGTWKDLTDSVNTAFRNLTGQVRNIAEVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTMV
DQLSSFAEQVTQMARDVGTEGRLGGQARVDGVSGTWKDLTDSVNFMAGNLTSQVRQIAQV
TTAVASGDLSQKIEVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEGRLGGQAQ
VPGVAGVWRDLTDSVNGMAGNLTAQVRNISQVATAVARGDLSQKIDVDARGEILELKTTI
NTMVDQLSSFAEQVTRVAREVGTEGQLGGQAEVKGVSGTWKDLTQSVNGMANNLTSQVRN
IAEVTTAVAQGDLSKKITVDAKGEILALVTTVNTMVDQLSSFAEQVTRVAREVGTEGKLG
GQAQVRGVSGIWKDLTDNVNLMANNLTGQVRNISQVATAVANGDLTKKVTVETSGEVAQL
ADTVNIMVTTLSSFAAEVTRVAREVGTDGILGGQARVPGVAGTWKDLTESVNSMANNLTG
QVRNIAQVTTAIAKGDLTRKIDIEARGEILALKTTINTMVDQLSSFADQVTRVAREVGTE
GQLGGQARVRDVAGTWKDLTESVNEMAGNLTRQVRAIAEVATAVTRGDHGVKIDVDAAGE
ILQLQGYINTMIRNLRETTLANQEQDWLKGNLARISALMQGRRDLTDVAGLIMSELTPAV
SAQHGAFFLAVPTGSRVEDAGVGGGTDGSYELRLLGSYGYSHGSMPTTFAPGDSLIGTAA
VEKRTILMENAPAGYLKITSGLGQAPPTHVIVLPVVFEGVVLGVLELAAFQPFTQIQKDF
LSQIAEMIATSVNTISVNTKTEVLLKQSQELAEQLQDRSVELESRQKALEDSNAQLEEKA
AQLAQTNRDIEIKNSEIEDARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILA
KLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLV
DYVEATFRPLTAEKSLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDTGAVELV
IRSAKSDVPASIREQMLEHGSLRDADAELIAFSVTDTGIGIAQSKMRVIFEAFKQADGTT
SRKYGGTGLGLSISREIARLLGGEIYVVSEPGRGSTFTLYLPLHPTELPPHGYGQLGTGT
LAIGPAREQRATAPEEAAEPAGEETAPVKPDAERAAATLAQRSRQRAAAAGERRALERGQ
RRAPEESWLNNGQDLVTAASPVHEFGGEKVLIVDDDIRNVFALTSVLEQNGLQVLYAENG
REGIEVLEQHDDVALVLMDIMMPEMDGYATTAAIRKMPQFAGLPIIALTAKAMKGDREKS
IDSGASDYVTKPVDTDHLLSVMDQWMRAG
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcggagcggcgcggggcgcaagcacgcgcgcgaagggcggacggtcccgg
aagagcgggacgatcgaggtggatgcggcggcgctggaccggctgcgtaccgccctcgtg
gcgatgcgggacggtaacttccgtaaacgtctgaccgtcgctggtgaaggaccgatggcc
gaggtctcggccatcttcaatgaggtcgccgaccgtaatctccatctgaccaacgagctg
gcccgggtgcgccgcgtcgtcggacgggacggcaagctcaccgagcggctggaggcgggg
gcctgcgaagggtcctgggcggcggcgatcgatgcgtccaacgcgctcgtggatgatctc
gtgcgcccggtatccgaggtggggcgggtgctcaccgcggtcgctgagggcgatcttgaa
cagcggatggagctgcgtgctgagggcgcgaacggctccgtgcatccgctgcgcggcgag
tttctgaaagtgggccgcaccgtcaatgggctggtcgaccagctctcggtgttcacggac
gaggtgacccgggtagccagcgaggtcggtaccgagggcaagctgggcggtcaggccaag
gtgcgcggtatgtccggctcctggaaggacctgaccgactccgtcaatacgatggcgtcc
cggctgaccgctcaggtgcgcgatatcgcgctggtgacgacggcggtcgccaagggggat
ctgtcccgcaaggtcaccgtgcatgtggccggcgagatgctggagctgaagaacaccgtg
aacaccatggtggaccagctctcctccttccagtccgaggtcacccgggtcgctcgggaa
gtcggcaccgagggggagctgggcggccaggcccgggtgcagggcgtggcgggcgtatgg
caggacctcaccgactccgtcaatacgatggcgggcaatctgacctcgcaggtgcgggag
atcgcccaggtgaccacggcggtggccaacggcgatctgtcgcagaaggtcacggtgaac
gcacgcggtgaggtcgcgcagctcgccgacacgatcaatacgatgaccgagacgctgcgg
accttcgccgatgaggtgacccgggccgccagcgaggtcggcaccgagggcgtcctcggc
ggccaggctcaggtccctggcgcggcggggatctggaaggacctcaccgactcggtgaac
gccgccttccgtaatctcaccgctcaggtgcgggacatcgcccaggtgacgacggcggtg
gcgaatggtgatctgtcgcagaaggtcaccgttgatgtgtccggtgagatgctcgagctg
aagaacaccgtcaatacgatggtggatcagctctcctccttcggcgctgaggtcacccgg
gtggcgcgggaggtcggtgtcgagggtgagctgggcggccaggcgcaggtgccgggcgcg
gccggcacctggaaggacctgacggactccgtcaacacggccttccgcaacctgaccggc
caggtgcgcaatatcgccgaggtgacgacggcggtggcgaatggtgatctgtcgcagaag
gtcaccgttgatgtgtccggtgagatgctccagctgaagaacaccgtgaacaccatggtg
gaccagctgtcgtcgttcgccgagcaggtcacccagatggcccgggatgtgggcaccgaa
ggacggctgggcggccaggcccgggtggacggtgtctcggggacctggaaggacctcacc
gactcggtgaacttcatggcgggcaacctgacctctcaggtacggcagatcgcccaggtg
accaccgcggtggcgagtggtgatctctcacagaagatcgaggtcgacgcccgcggcgag
atcctggagctcaagaacaccatcaacacgatggtcgaccagctctcggccttcgcggac
caggtgacccgggtagcgcgcgaggtcggtaccgaaggacggctgggtggtcaggcacag
gtgccgggtgtcgcgggcgtctggcgcgatctgaccgactcggtgaacggtatggcgggg
aacctcaccgctcaggtccgtaatatctcgcaggtcgcgacggcggtggcgcgcggtgat
ctctcgcagaagatcgatgtggatgcgcgcggcgagatcctggagctgaagaccaccatc
aatacgatggtcgaccagctgtcgtcctttgctgagcaggtgacccgggtggcccgcgag
gtgggcaccgaggggcagctgggcggtcaggccgaggtgaagggtgtctccggcacctgg
aaggacctcacgcagtccgtgaacggcatggcgaacaacctgacctcccaggtgcgtaac
atcgccgaagtcaccaccgcggtagcccagggcgatctctccaagaagatcaccgttgac
gccaagggcgagatcctggccctggtgaccaccgtgaacacgatggtggaccagctgtcg
tcctttgccgagcaggtgacccgggtggcccgcgaggtgggcaccgagggcaaactcggc
gggcaggcgcaggtgcgtggggtctccggcatctggaaggacctgaccgacaacgtcaat
ctgatggccaacaacctcaccggccaggtccgtaatatctcccaggtcgcgacggcggtc
gccaacggtgacctcaccaagaaggtcaccgtcgaaaccagcggtgaagtggctcagctg
gctgacaccgtcaacatcatggtgacgacgctgtcgtccttcgccgctgaggtcacccgg
gtggcccgtgaggtgggcaccgacggcattctcggcggccaggcgcgggtcccgggtgtc
gcggggacgtggaaggacctcaccgaatcggtgaactcgatggcgaacaacctcaccggc
caggtgcggaacattgcccaggtcaccaccgccatcgcgaagggcgatctcaccaggaag
atcgatatcgaggcgcggggcgagatcctggcgctgaagacgaccatcaacacgatggtg
gatcagctgtcgtcgttcgccgatcaggtgacccgggtggcccgcgaggtgggtaccgag
ggccagctgggcggccaggcgcgggtccgcgatgtggccggcacctggaaggacctcacc
gagtccgtgaatgagatggcggggaacctcacccgtcaggtgcgtgcgatcgccgaggtg
gccaccgcggtgacccgtggcgaccacggggtgaagatcgatgtggatgcggcgggagag
atcctgcagctccagggctatatcaacacgatgatccgcaacctgcgggagaccaccctc
gccaaccaggaacaggactggctcaagggcaatctggcccgtatctccgcgctgatgcag
ggccgccgtgacctcacggacgtggccggactcatcatgagcgagctgacccccgcggtc
tccgcacagcacggcgcgttcttcctggccgtacccaccggttcccgggtggaggacgcc
ggggtgggcgggggcacggatggctcgtacgagctgcggctgctgggctcgtacggctac
tcacacggctcgatgccgaccaccttcgcgcccggtgactccctgatcggtaccgcggcg
gtggagaagcgcaccatcttgatggagaacgctccggcgggctacctcaagatcacttca
gggctcggacaagccccgcccacccatgtgatcgtgctgccggttgtctttgagggtgtg
gttctgggcgtgctggagctggcggccttccagcccttcacccagatccagaaggacttt
ctcagccagatcgctgagatgatcgccacgagcgtcaacaccatcagcgtcaatacgaag
accgaagtcctgctgaagcagtcgcaggagctcgccgagcagctacaggaccgctcggtc
gagctggaaagccggcagaaggcactggaggattccaacgcccagctggaggagaaggcc
gcgcagctggctcagaccaaccgcgatatcgagatcaagaactctgagatcgaggacgcc
cggcaggtgctggaagagcgcgccgaacagctcgcggtctccatgcgctacaagtcggag
ttcctggcgaatatgtcgcatgagctgcgcaccccgctcaactcgctgctcatcctggcc
aagctgctcgctgacaacgctgagggaaatctctccccgaagcaggtggagttcgccgag
acgattcatggcgcgggatccgatctgttgcagctcatcaacgacatcctcgatctgtcg
aaggtcgaggcgggcaagatggacgtcagcccgactcgtatcgcgctggtgcagctggtc
gactatgtcgaggccaccttccggccgctcaccgcggagaagagcctggacttctcggta
cgggtctcaccggagcttcccgcgacgctgcacaccgatgagcagcggctgctgcaggtg
ctgcgcaatctgctgtccaacgcggtgaagttcaccgacaccggcgccgtcgagctggtg
atccgctcggccaagtccgatgtccctgcctcgatccgcgagcagatgctggagcacggc
tccctgcgggacgccgacgccgagctgatcgccttctcggtgaccgataccggcatcggt
atcgcgcagagcaagatgcgggtcatcttcgaagcgttcaagcaggcggacgggacgacc
agccggaagtacggcggcaccgggctcggtctgtccatcagccgggagatcgcccggctg
ctgggcggtgagatctacgtcgtcagcgagccggggcgtggctcgaccttcacgctctat
ctgccgctgcatccgaccgaactgcccccgcatggatacggccagctgggcaccggcacg
ctcgccatcggcccggcgcgcgagcagcgtgcgacggcgccggaggaggcggcggagccc
gcgggcgaggagacggcgcccgtgaagcccgatgccgagcgcgcggcggccacactcgcc
cagcgcagccgccagcgcgcggcggccgccggcgagcggcgtgcgctggagcggggacag
cggcgggcgccggaggagtcctggctgaacaacggccaggatctggtgacggcggccagc
cccgtccacgagttcggcggggagaaggtgctcatcgtcgatgacgacatccgcaatgtg
ttcgccctcaccagcgtgctggagcagaacgggttgcaggtgctgtacgcggagaacggc
cgtgagggcatcgaagtgctggaacagcacgacgatgtggcgctggtcctgatggacatc
atgatgccggagatggacggctacgccacgacggcggcgatccgtaagatgccgcagttc
gccgggctgccgatcatcgcgctcaccgccaaggcgatgaagggagaccgggagaagagc
atcgactccggggcttccgactatgtcactaagccggtggatactgatcacttgttgtct
gtcatggatcaatggatgcgtgcgggctga
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integrated database retrieval system
