Streptomyces gobiensis: test1122_21485
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Entry
test1122_21485 CDS
T08145
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sgob
Streptomyces gobiensis
Pathway
sgob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
test1122_21485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgob03021
]
test1122_21485
Transcription machinery [BR:
sgob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
test1122_21485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
UGY94032
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Position
4614098..4615687
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AA seq
529 aa
AA seq
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MSASTSRTLPAEIAESESVMALIERGKAEGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKTPAKRTATKAVAAKTTAAKKATAAAKTASAEDA
EVTEGTDELSESKPAKKAAAKKTAAKKTAVKKTAAKKTATKKTAAKKSVVDELLEGDDEG
IEEPPAKGGKAGAEDAAASDGKTENEGFVLSDDDEDDAPAQQVAAAGATADPVKDYLKQI
GKVPLLNAEQEVELAKRIEAGLFAEDKLAGSDKLAPKLKRELEIIAEDGRRAKNHLLEAN
LRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAM
ADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGRE
PISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRF
GLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctccccgcggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgaggggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccaa
atcctcgacgaggagggtgtgacgctgatggtgagtgccgccgaggcgcccaagcgcacc
cgtaagagcgtcgcagcgaagaccccggccaaacgcaccgccaccaaggcggtcgccgcc
aagaccaccgccgccaagaaggccaccgccgccgcgaagacggcgtcggctgaggacgcc
gaggtcaccgagggcactgacgagctgtcggagtcgaagcccgccaagaaggccgctgcg
aagaagaccgccgccaagaagaccgccgtgaagaagacggcggcgaagaagacggccacc
aagaagacggccgctaagaagtccgtcgtcgacgagctgcttgaaggtgatgacgagggc
atcgaggagccccccgccaagggcggcaaggccggggcggaagacgccgccgcctccgat
ggcaagaccgagaacgagggtttcgtcctctccgacgacgacgaggacgacgctcccgcc
cagcaggtcgccgcggccggcgccaccgccgacccggtcaaggactatctcaagcagatc
ggcaaggtcccgctgctcaacgccgagcaggaggtcgaactcgccaagcgcatcgaggcg
gggctgttcgccgaggacaagctggcgggttcggacaagctcgcgcccaagctcaagcgt
gagctggagatcatcgccgaggacggccgccgggccaagaatcacctcctggaggccaac
ctccgcctcgtggtctcgctggccaagcggtacaccggtcgcggcatgctcttcctggac
ctgatccaggagggcaacctcggtctcatccgcgccgttgagaagttcgactacaccaag
ggctacaagttctccacgtatgccacgtggtggatccggcaggccatcacacgcgccatg
gctgaccaggcccgcaccatccgtatcccggtgcacatggtggaggtcatcaacaagctg
gcccgtgtccagcgccagatgctccaggatctgggccgcgagcccaccccggaggagctg
gccaaggagctggacatgacgcccgagaaggtcgtcgaggtccagaagtacggccgtgag
ccgatctccctgcacaccccgctgggggaggacggcgacagcgagttcggtgacctcatt
gaggactccgaggccgtcgtcccggccgacgcggtcagcttcacccttctccaggagcag
ctgcactccgtcctcgacacgctcagcgagcgtgaggcgggcgtggtctccatgcgcttc
ggtctcaccgacggccagccgaagactctcgatgagatcggcaaggtctacggcgtgacc
cgtgagcggatccggcagatcgagtccaagaccatgtcaaagctgcgccacccgtcccgc
tctcaggtcctgcgggactacctggactga
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