KEGG   Streptomyces gobiensis: test1122_21485
Entry
test1122_21485    CDS       T08145                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sgob  Streptomyces gobiensis
Pathway
sgob02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sgob00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    test1122_21485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgob03021]
    test1122_21485
Transcription machinery [BR:sgob03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     test1122_21485
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 CDC27
Other DBs
NCBI-ProteinID: UGY94032
LinkDB
Position
4614098..4615687
AA seq 529 aa
MSASTSRTLPAEIAESESVMALIERGKAEGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKTPAKRTATKAVAAKTTAAKKATAAAKTASAEDA
EVTEGTDELSESKPAKKAAAKKTAAKKTAVKKTAAKKTATKKTAAKKSVVDELLEGDDEG
IEEPPAKGGKAGAEDAAASDGKTENEGFVLSDDDEDDAPAQQVAAAGATADPVKDYLKQI
GKVPLLNAEQEVELAKRIEAGLFAEDKLAGSDKLAPKLKRELEIIAEDGRRAKNHLLEAN
LRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAM
ADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGRE
PISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRF
GLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1590 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctccccgcggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgaggggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgttctgcgcagcctcaaccaa
atcctcgacgaggagggtgtgacgctgatggtgagtgccgccgaggcgcccaagcgcacc
cgtaagagcgtcgcagcgaagaccccggccaaacgcaccgccaccaaggcggtcgccgcc
aagaccaccgccgccaagaaggccaccgccgccgcgaagacggcgtcggctgaggacgcc
gaggtcaccgagggcactgacgagctgtcggagtcgaagcccgccaagaaggccgctgcg
aagaagaccgccgccaagaagaccgccgtgaagaagacggcggcgaagaagacggccacc
aagaagacggccgctaagaagtccgtcgtcgacgagctgcttgaaggtgatgacgagggc
atcgaggagccccccgccaagggcggcaaggccggggcggaagacgccgccgcctccgat
ggcaagaccgagaacgagggtttcgtcctctccgacgacgacgaggacgacgctcccgcc
cagcaggtcgccgcggccggcgccaccgccgacccggtcaaggactatctcaagcagatc
ggcaaggtcccgctgctcaacgccgagcaggaggtcgaactcgccaagcgcatcgaggcg
gggctgttcgccgaggacaagctggcgggttcggacaagctcgcgcccaagctcaagcgt
gagctggagatcatcgccgaggacggccgccgggccaagaatcacctcctggaggccaac
ctccgcctcgtggtctcgctggccaagcggtacaccggtcgcggcatgctcttcctggac
ctgatccaggagggcaacctcggtctcatccgcgccgttgagaagttcgactacaccaag
ggctacaagttctccacgtatgccacgtggtggatccggcaggccatcacacgcgccatg
gctgaccaggcccgcaccatccgtatcccggtgcacatggtggaggtcatcaacaagctg
gcccgtgtccagcgccagatgctccaggatctgggccgcgagcccaccccggaggagctg
gccaaggagctggacatgacgcccgagaaggtcgtcgaggtccagaagtacggccgtgag
ccgatctccctgcacaccccgctgggggaggacggcgacagcgagttcggtgacctcatt
gaggactccgaggccgtcgtcccggccgacgcggtcagcttcacccttctccaggagcag
ctgcactccgtcctcgacacgctcagcgagcgtgaggcgggcgtggtctccatgcgcttc
ggtctcaccgacggccagccgaagactctcgatgagatcggcaaggtctacggcgtgacc
cgtgagcggatccggcagatcgagtccaagaccatgtcaaagctgcgccacccgtcccgc
tctcaggtcctgcgggactacctggactga

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