Streptomyces gobiensis: test1122_23575
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Entry
test1122_23575 CDS
T08145
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob00061
Fatty acid biosynthesis
sgob00071
Fatty acid degradation
sgob01100
Metabolic pathways
sgob01212
Fatty acid metabolism
sgob02024
Quorum sensing
sgob04146
Peroxisome
Module
sgob_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
test1122_23575
00071 Fatty acid degradation
test1122_23575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
test1122_23575
09145 Cellular community - prokaryotes
02024 Quorum sensing
test1122_23575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgob01004
]
test1122_23575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgob04147
]
test1122_23575
Enzymes [BR:
sgob01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
test1122_23575
Lipid biosynthesis proteins [BR:
sgob01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
test1122_23575
Exosome [BR:
sgob04147
]
Exosomal proteins
Exosomal proteins of breast milk
test1122_23575
Exosomal proteins of breast cancer cells
test1122_23575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
UGY94416
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All DBs
Position
5077306..5079132
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AA seq
608 aa
AA seq
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MREFTVPALVTAPQVGGLADAVFDHADADPYQVSLARKDADGHWRDVTAGEFRDQVLALA
KGLLAEGVRFGDRVAIMSRTRYEWTLFDFALWSIGAQPVPVYPTSSAEQVYWMLHDAEVS
AAIVEHEDHAMTVGSVIGRLPLLRKLWQLDSGAEDELRAAGARIDTDVVQRHRMALTPET
TATIIYTSGTIGRPKGCVITHANFMSECDNIVEKYEPVFHSKPGDQASTLLFLPLAHVFG
RMVEVAAVRGRVKLGHQPDMTAAALLPDFAAFRPSFILAVPYLFERIFNAARRKAEAEGK
LGPFDKAVEVAVRYAEAVEHQSFGTGRGPGAVLRIQHQIFDKLVYGKLRDAMGGRCRHAM
SGGSAMERRLGLFFDGAGMRIFEGYGLTESTAAAVANPPERTRFGTVGRPVPGTTVHVAE
DGEIWLHGGQIFQGYHNHPKATDEALHDGWLATGDLGSLDEDGYLTITGRKKEILVTSGG
KSVAPAQLENRVRAHPLVAQCVVVGNDRPYVAALVTLDPEAVAHWLSMRHKPELPPAELV
RDADLEKEIRRAVVAANTQVSQAESIRTFRILGAQFTEEYGLLTPSLKLKRKAIEKAYAV
EIEALYRT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcaccgtcccagccctggtgacggcgccccaggttggagggctggcggac
gccgtcttcgaccatgccgacgcggatccgtaccaggtgtcgctggcccgtaaggacgcc
gacggacactggcgggacgtcaccgcgggtgagttccgcgaccaggtgctggctctcgcg
aaggggctgctggccgagggcgtgcggttcggcgaccgggtggcgatcatgtcgcgtacc
cgttacgagtggactctcttcgacttcgcgctctggtccatcggggcccagccggtgccg
gtctatccgacctcctcggccgagcaggtgtactggatgctccatgacgcggaggtctcg
gcggccatcgtggagcatgaggaccacgccatgaccgtcggctcggtgatcggccggctg
ccgctgctcagaaagctgtggcagctggactcgggcgccgaggacgagctccgggcagcc
ggggcgcgtatcgacacggatgtggtgcagcgccaccggatggcgctgaccccggagacc
acggccaccatcatctacacctccggcaccattggccgtcccaaggggtgtgtgatcacg
cacgccaattttatgtccgagtgcgacaacatcgtcgagaagtacgagccggtcttccac
tccaagcccggggaccaggcgtccacgctgctgtttctgccgctggcccatgtcttcggg
cgcatggtggaggtcgcggcggtgcgcggccgggtgaagctgggccaccagccggatatg
accgctgccgcgctcctgcccgacttcgccgccttccggccgagcttcatcctggccgtg
ccgtacctctttgagcggatcttcaacgccgcacgccgcaaagcggaggccgaggggaag
ctgggccccttcgacaaggccgtggaggtggcggtgcgctacgccgaggcggtcgagcac
cagtcgttcgggacaggccggggaccgggcgctgtgctgcggatacagcaccagatcttc
gacaagctcgtctacggcaaactgcgggacgcgatgggcggccgctgccggcacgccatg
tcgggcggctcagcgatggaacggcggctggggctgttcttcgacggcgcgggcatgcgg
atcttcgagggatacggtctgacggagtcgaccgcggcagcggtcgccaacccacccgaa
cggacgcgcttcggcacggtgggccgtccggtaccggggacgacggtgcatgtcgcggag
gacggcgagatctggctgcacgggggccagatcttccagggctaccacaaccaccccaag
gccaccgatgaggcgctgcacgacggctggctggccaccggtgatctgggctcactggac
gaggacggctatctgacgattaccgggcggaagaaagagatcctggtgacgtccggcggt
aagagcgtggcgcccgcgcagctggagaaccgggtgcgggcgcacccgctggtggcccag
tgtgtcgtggtgggcaacgaccgcccgtatgtggccgcgctggtcaccctggacccggag
gcagtggcgcactggctgtcgatgcggcacaagccggagctgccccctgcggagctggtg
cgtgacgcggatctggagaaggaaatccggcgggcggtggtcgccgcgaacacgcaggtg
tcgcaggcggagtcgatccggacgttccggatactgggcgctcagttcaccgaggagtac
gggctgttgacgccttcgctgaagttgaagcggaaggcgattgaaaaggcttacgcggtg
gagatcgaggcgctgtaccgcacttag
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