Scandinavium goeteborgense: A8O29_001340
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Entry
A8O29_001340 CDS
T06630
Name
(GenBank) HAMP domain-containing protein
KO
K05875
methyl-accepting chemotaxis protein II, aspartate sensor receptor
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe02020
Two-component system
sgoe02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A8O29_001340
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
A8O29_001340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sgoe02035
]
A8O29_001340
Bacterial motility proteins [BR:
sgoe02035
]
Flagellar system
Chemotaxis proteins
MCPs
A8O29_001340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HBM
4HB_MCP_1
HAMP_2
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
QKN79994
LinkDB
All DBs
Position
122246..124162
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AA seq
638 aa
AA seq
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MKISSFFLNLKIGNKLTSGFVVIIALMIAILLTSILGLKNIQDKVTKGAISGALINDLFD
ARLSRTNYQYTGDPQYLQQSSAAIDKMATVLAELKTFSWSVEGGKMVERTGNAVDSYIAE
RTPFNTAMKQKIDAEKQLNSASICDDSRIIAALSTTDALSIDQKFQAAQLAFLFNDIDSR
LTDYKLKPDAAGLTRMKQRLEEGVLHAQQMLPWLPEKERVIVGTAILSFNQYIETLAPYQ
QAWGQLNAASDKLLVRANELTESINALRTLQERMVEAIVHQMQWTMQLVAALGIIIGVLL
AWTITRAITRPLQETLTLAERIADGDLTHSVESQRRDELGKLMRAMGLMNTNLKGIIHDV
REGVANVAHSSTEIARGNIDLSSRTEQQAAAVVQTAASMEELTSTVALNAENAVQARKLS
EQAAEKASQGCEVSRAVVDTMRSVQGSAHRISEITTVINGIAFQTNILALNAAVEAARAG
EQGKGFAVVAGEVRNLAQRSAQSAKEIETLIKESVGIVDTGFKLVEQAGTAMADIETSVG
QVRDIMNEIASATDEQSRGISQIAQAMAEMDTTTQQNAALVVESSSAANSLEEQAIKLEE
SVSVFRLSSEPMAKPRRATAVLAKPLSSAKEADNWSAF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttcatcttttttcttaaatctgaaaataggtaataagctgacgtcaggattt
gtggtgatcattgccttaatgatagccattcttctgaccagtattctgggtttgaaaaat
attcaggacaaggtcaccaaaggcgcaatcagcggtgcgctgattaacgatctttttgat
gcccgattaagtcgtaccaattatcaatacaccggcgatccgcaatatctgcaacaaagt
agcgcggctatcgacaaaatggcgacggtattggccgagttgaaaacgttttcatggtcg
gtggagggagggaaaatggttgagagaacgggcaatgcggtggacagttacatcgcggag
cgcacaccgtttaataccgccatgaagcaaaagattgatgctgaaaagcagctgaactcg
gcgtccatttgcgatgactcccgcattattgccgccttgagcaccacggatgccttaagc
attgatcaaaaattccaggcggctcagctggctttcctgttcaacgatatcgactcgcgg
ctgacggactacaagcttaaacctgacgcagccggacttactcgcatgaaacagcgcctg
gaagaaggggttcttcacgcccaacagatgctgccatggctgccggaaaaagagcgcgtg
attgtcggtacggccatcctgtcgttcaatcaatatattgaaaccctggcgccttaccag
caggcctggggtcagctgaatgccgcgtcggacaaattactcgttcgcgccaatgagctg
acagaatccattaatgcgttgcgcacgcttcaggaacgcatggtggaagcgattgtccat
cagatgcagtggacgatgcagctggttgcggctctgggtatcatcatcggcgtgctgctg
gcctggactatcacccgtgccattacccgtcctttgcaggaaaccctgacgctggcggag
cgtattgccgatggcgatctgacccattccgttgagagccaacgccgcgatgaactcggg
aagctgatgcgagccatgggtctgatgaataccaatctgaaaggcattattcacgatgtc
cgtgaaggggtggcgaacgtggcgcattcctccacagagatagcgcgggggaatatcgac
ctttcctcacggaccgaacagcaggccgcggcggtagtgcaaaccgcggccagcatggag
gagctgacgtccaccgtggcattgaacgctgagaacgccgttcaggcgcggaagctctct
gagcaggcggcggaaaaggccagccagggctgcgaagtctcgcgagcggtggtggacacc
atgcgttctgtgcagggcagcgcccatcgcatttcagaaatcactacggtgataaacggc
attgccttccagaccaacattctggcgctgaacgccgcggttgaagcggccagagcgggc
gagcaggggaaaggctttgcggtagtggccggtgaagtgcgcaatcttgctcaacgcagc
gcccagtcggcgaaggaaattgaaacgctgatcaaagagtcggtcggcattgtcgatacc
ggcttcaagctggttgaacaggccgggacagcgatggcggatattgaaacgtcggtcggt
caggtgcgagacatcatgaacgagattgcgtcggcgaccgatgagcagagccggggtatt
tcgcaaatcgctcaggcgatggcggaaatggacaccaccacgcagcagaacgccgcgctg
gtggtggaatcctcttccgcagcgaacagcctggaagaacaagcgatcaagcttgaggag
tcggtgtccgttttcagactttccagcgaaccgatggctaagccgcgccgcgcaacggcg
gtcctggcaaagccgctttcgtctgccaaagaagcagataactggagcgcgttctga
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