Scandinavium goeteborgense: A8O29_001940
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Entry
A8O29_001940 CDS
T06630
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgoe03021
]
A8O29_001940 (rpoH)
Transcription machinery [BR:
sgoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A8O29_001940 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_3
SANT_DAMP1_like
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QKN80109
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All DBs
Position
257963..258817
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AA seq
284 aa
AA seq
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MTKDMQTLALAPVGNLESYVRAANAWPMLTADEERALAEKLHYQGDLEAAKTLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMSAQDM
AFDMSADDDSESHSVAPVLYLQDKTSNFADGIEDDNWEEQAANKLTHAMEGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttagctttagcccctgttggcaacctggaatcatatgtc
cgggcggcaaacgcatggccgatgttgacggctgatgaagaacgggcactggcggaaaag
ctgcattaccagggcgatctggaagcagcgaagacgctgatcctgtctcacctgcgcttt
gttgttcacgttgctcgtaactattcgggctacggcctgccgcaggcagatttgattcag
gaaggtaacatcggcctgatgaaagccgtgcgccgattcaacccagaagtgggtgtgcgc
ctggtgtcttttgccgtgcactggatcaaagccgaaattcacgaatacgtgctgcgtaac
tggcgtatcgtcaaagtcgcgaccaccaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaatcaggatgaagtggaaatggttgcgcgcgag
ctgggtgtttccagcaaagacgtgcgtgaaatggaatcgcgaatgtccgcgcaggacatg
gcctttgatatgtcagctgatgacgattccgaaagccattccgttgcaccggtgctctac
ttacaggataaaacgtcaaactttgccgacggcatcgaagacgataactgggaagagcag
gccgcgaacaaactgactcacgcgatggaaggtctggacgaacgtagccaggacatcatc
cgcgctcgctggctggacgaagacaacaagtccacgctgcaagagctggccgaccgctat
ggcgtgtccgccgagcgtgtgcgtcagcttgaaaagaacgcgatgaaaaaactgcgtatg
gcgattgaagcgtaa
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