Scandinavium goeteborgense: A8O29_005075
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Entry
A8O29_005075 CDS
T06630
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgoe03016
]
A8O29_005075 (truD)
Enzymes [BR:
sgoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A8O29_005075 (truD)
Transfer RNA biogenesis [BR:
sgoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A8O29_005075 (truD)
Prokaryotic type
A8O29_005075 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKN80693
LinkDB
All DBs
Position
900259..901308
Genome browser
AA seq
349 aa
AA seq
DB search
MIMFNDLTYLHGKPQGQGLLKANPEDFLVVEDLGFSPDGEGEQLLVRILKNGCNTRFVAD
ALAKFLKVHAREVSFAGQKDKHAVTEQWLCVRLPGKEMPDLSKFELEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSNREEAEARLQAIAEKGVPNYFGAQRFGLGGSNLLGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQLVSERLKKPDFNQVVDGDALQLAGRGSWFVATDEE
MPELQSRVDHRELMITASLPGSGDWGTQRAALEFEQQTLAEETQLQSLLLREKVEAARRA
MLLYPQQMSWNWWDDVTVEVRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgttcaatgatctgacttacctgcacggcaaaccgcaggggcaggggttactg
aaagccaatccggaagattttctggtggtcgaagacctgggcttttcaccggacggtgaa
ggtgaacaactgctggtacgcatcctgaaaaacggctgcaatacccgctttgtggccgat
gcgctggcgaaattcctcaaagtgcacgcccgtgaagtgagcttcgccgggcagaaggat
aagcacgccgtcaccgaacagtggctgtgcgtccgtctgccgggcaaagagatgccggat
ttaagcaagtttgagctggaaggctgtcaggtgctggagtacgcgcgccataaacgcaag
ctgcgcctcggggcgctgaagggtaacgcgtttaccctggtgctgcgtgaagtcagcaac
cgtgaagaagcggaagcgcgtctgcaagctattgctgaaaagggcgtaccgaactatttc
ggcgctcagcgttttggtcttggcggcagcaatctgcttggcgcgctgcgctgggcgcag
agcgatgcgccggtgcgagatcgtaataaacgcagtttttggttgtctgcggcccgcagt
gcgttgtttaatcagctggtgagcgagcgtttaaaaaaaccggactttaatcaagttgtt
gacggcgatgcgctacaattagcgggacgcggcagctggtttgtggcaacggatgaagag
atgcccgagcttcagtcccgcgttgatcatcgcgagctcatgattacggcatcgctgccg
ggcagcggtgactggggaacgcagcgtgcggccctggaatttgaacagcaaacgctggcg
gaagaaacgcaactgcagtcgttattgctgcgcgaaaaagtcgaggcagcgcgacgcgca
atgcttctttacccgcaacagatgagctggaactggtgggatgacgtcaccgtcgaggta
cgtttctggctgccggcaggcagttttgccaccagtgttgtaagggaacttatcaacaca
acaggtgattatgcgaatattgctgagtaa
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