Scandinavium goeteborgense: A8O29_005740
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Entry
A8O29_005740 CDS
T06630
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A8O29_005740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_005740
02044 Secretion system [BR:
sgoe02044
]
A8O29_005740
Transporters [BR:
sgoe02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
A8O29_005740
Secretion system [BR:
sgoe02044
]
Type I secretion system
Adhesin protein transporter
A8O29_005740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_23
PIG-F
NACHT
Motif
Other DBs
NCBI-ProteinID:
QKN80809
LinkDB
All DBs
Position
complement(1015072..1017264)
Genome browser
AA seq
730 aa
AA seq
DB search
MTRAAPPVEELISDHALSNWALAIGHVAAHYRVVCSPGAIQANAPWFKGKTHTPALTQLS
RQAGLSFHQLTLNEHAFSQWRLPVVAELDDGQLAVIEHFNGEDAVDVFMIDGDGESNRVV
ASELLSSVKYVAALRPLSALKDSRVDTYVSRFSPDWMKGLVLQDLRPYIPVMIAAFLVNV
LSLAGIVFSMQVYDRVIPAQSYPTLYVLATGVLISVIFGFLLREARTHIMDVLGKRADMR
ISDRVFSHALRLRNSAVPRSTGSFISQLRELEQIREMITSSTLSTLVDLPFFFLFVIVLG
IIAPQLSWIAPIAAVLMVLPGLLLQKKLAILANQSAHESTLRNAVLVESVQGLEDIKLMQ
AENRFLQQWNSYIRITGESGLRTRKVTQGLIGWGMSVQSLVYAAVILFGAPLVIEGTLTT
GSVVAASMLASRMIAPMAGLCGVLARWQQVKAAKTGLDSIMQLPTETQRDETLVHQEIFH
GHYVFENAHFRYHHEDQRVPLRISRLEILPGERVALLGRNGAGKSTLLQALAGGIEIING
DLRLDNLSISQIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHASDEAVFEVLEICGA
DSFVKRLPKGLDHPIMEGGNGLSGGQRQAILLARMLLRSPNIVLLDEPSASLDEHTEREF
IQRLGNWLGNRTLIVATHRVPMLELVERVVVLKEGQLVMDAPKAQAMNNSRSPVPAAASG
RGWNNENQSA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgccgctcctcctgttgaagaactcatcagcgaccatgccctcagcaactgg
gcgctggcgatcggtcacgtcgcggcccactatcgggtggtttgttcgccaggtgcgatt
caggccaacgccccgtggtttaaaggtaaaacgcacactccggccctgacgcaactttcg
cgtcaggccgggctgtcgttccatcagctcaccctcaacgaacacgcgttcagccaatgg
cgactgccagtggtagcggaactggatgacggccagctggcggtgatcgagcacttcaac
ggcgaagatgcggtcgacgtgttcatgattgacggtgacggcgaaagcaaccgcgtggtc
gccagcgaactgttatcgtcggtgaaatatgtcgcggccctacgcccgctgtcggcgctc
aaggacagccgcgtcgacacctacgtttcccgcttcagccccgactggatgaaagggtta
gtgttgcaggatcttcgcccgtacatcccggtgatgatcgccgcatttttggttaacgtg
ctgtcgctggccgggatcgtcttttcgatgcaggtgtatgaccgggtgatcccggcgcag
tcctacccgacgctgtacgtgctggcgaccggggtactgatttccgtgatcttcggtttt
ctgctgcgtgaagcacgcacgcacatcatggacgtgctcggcaaacgcgccgacatgcgt
atttccgaccgcgtcttcagccacgccctgcggctgcgcaacagcgccgtgccccgctcc
accggcagtttcatttctcagctgcgcgagttggagcagatccgcgaaatgatcacctcg
tccacgctttcgacgctggtcgatctgccgttctttttcctgttcgttattgtgctcggg
atcatcgccccgcagctgtcctggatcgcaccgattgccgcggtattgatggtgctgccc
ggcttgctgctgcagaaaaaactcgcgattctcgccaaccagtcagcgcacgaatcgacc
ctgcgcaacgcggtactcgtggaaagcgtgcaggggctggaagacatcaaactgatgcag
gcggaaaaccgttttttacagcagtggaacagctacattcgcatcaccggtgaatccggg
ctgcgcacccgcaaagtgacgcaggggcttattggctggggaatgtctgtgcaaagcctg
gtctacgcggcggtgattctattcggcgcgccgctggtgattgaaggcacgctgaccacc
ggttcggtggttgccgcgtcgatgctggcgtcacggatgattgcgcctatggccgggctg
tgcggcgtgctggcccgctggcagcaggtgaaagccgcgaaaaccgggctcgacagcatc
atgcagttgccgaccgaaactcagcgcgacgaaacgctggtgcatcaggaaattttccac
ggtcactacgtgtttgagaacgcgcacttccgctatcaccacgaagatcagcgcgtgccg
ctgcgcatttcacgtctggaaattctaccgggcgagcgcgtggccctgctcgggcgcaac
ggcgcagggaaatccacgttattgcaggccctggcgggcgggatagaaatcatcaacggc
gatctgcggctcgacaacctcagcatctcgcaaatcgacatggccgacctgcgacgcaac
atcggttttctgagccagaacgcgcggctgtttttcggcaccctgcgcgaaaatctgacc
ctcggtgcaccgcacgccagcgatgaagcagtgtttgaagtgctggaaatttgcggtgcc
gacagcttcgtcaaacgtctgccgaaggggctggaccatccgataatggaaggcgggaac
gggctttccggcggtcagcgtcaggcgattttgctggcgcgcatgctgctgcgctcgccg
aatatcgtcctgctcgacgaaccgagcgcgtcgctggatgaacacaccgagcgcgagttt
atccagcgcctgggtaactggctcggcaaccggacgctgatcgtcgccacacaccgcgtg
ccgatgctggaactggtggaacgcgtggtggtgctgaaagaaggccagttggtcatggac
gcgccaaaagcacaggcgatgaacaacagccgttcgccggttccggcggcggccagcgga
cgggggtggaacaatgaaaaccaatcagcgtga
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