Scandinavium goeteborgense: A8O29_006085
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Entry
A8O29_006085 CDS
T06630
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00260
Glycine, serine and threonine metabolism
sgoe00460
Cyanoamino acid metabolism
sgoe00630
Glyoxylate and dicarboxylate metabolism
sgoe00670
One carbon pool by folate
sgoe00680
Methane metabolism
sgoe01100
Metabolic pathways
sgoe01110
Biosynthesis of secondary metabolites
sgoe01120
Microbial metabolism in diverse environments
sgoe01200
Carbon metabolism
sgoe01230
Biosynthesis of amino acids
sgoe01240
Biosynthesis of cofactors
sgoe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A8O29_006085
09102 Energy metabolism
00680 Methane metabolism
A8O29_006085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A8O29_006085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A8O29_006085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A8O29_006085
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A8O29_006085
Enzymes [BR:
sgoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A8O29_006085
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Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QKN80872
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Position
1100643..1101896
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYEDMAKQAQTHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEAVIECIKGKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtgatgcaggcgcagggttctcagttaaccaacaagtacgctgaaggttaccca
ggcaaacgctattacggcggctgtgaatatgttgatatcgttgagcagctggctatcgat
cgtgccaaagagctgtttggcgcagactacgccaacgtgcagccgcactctggttctcag
gcgaacttcgcggtgtacactgcgctgctgcaaccgggcgataccgttctgggtatgaac
ctggcgcaagggggtcacctgactcacggttccccggtcaacttctccggcaaactgtac
aacatcatcccttacggcattgatgagtccggtaaaattgactacgaagacatggcgaag
caggcgcagacccacaaaccgaagatgatcatcggcggcttctctgcttactccggtgtg
gttgactgggcaaaaatgcgtgaaatcgctgacagcatcggcgcatacttgttcgtcgac
atggcacacgttgccggtctgattgctgcaggcgtgtacccgaacccggttccccacgcg
cacgttgtgaccaccaccacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaaaggcggtgacgaagacctgtacaagaaattgaactctgccgtattcccaagcgcg
cagggcggcccgttgatgcacgttatcgctgcgaaagccgttgcgctgaaagaagcgatg
gagccagagttcaaagtctaccagcagcaagtggcgaaaaatgccaaagcgatggtagaa
gtgttcctgaaccgcggttacaaagtggtatctggcggcactgagaaccacctgttcctg
ctggatctggtggataaaaacctgaccggtaaagaagccgatgccgcactgggtcgcgct
aacatcaccgtcaacaaaaacagcgtaccaaacgatccgaagagcccgtttgtgacctcc
ggtatccgtatcggttctccggctgtgactcgccgcggcttcaaagaagctgaagtgaaa
gagctggctggctggatgtgtgacgtgctggacaacatcaatgatgaagccgtcatcgaa
tgcattaaaggtaaagtgctggatatctgcgcccgtttcccggtttacgcgtaa
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