Scandinavium goeteborgense: A8O29_006240
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Entry
A8O29_006240 CDS
T06630
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgoe03009
]
A8O29_006240 (der)
Ribosome biogenesis [BR:
sgoe03009
]
Prokaryotic type
GTPases
A8O29_006240 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
cobW
RsgA_GTPase
AAA_22
Roc
Ras
AAA_24
TniB
Nuc_deoxyri_tr2
SRPRB
Motif
Other DBs
NCBI-ProteinID:
QKN80901
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All DBs
Position
1136228..1137706
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AA seq
492 aa
AA seq
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MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI
DGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEGIAKHLRSREKATFLVANKT
DGIDPDQAVADFWSLGLGEIHAIAASHGRGVTSLIEHALLPFMDEVAPVEEVDEDALYWA
QFEAEQNGVPIEEPEDDFDPRSLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTR
DSIYIPMERDEREYILIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVIDAREGI
SDQDLSLLGFILNSGRSLVIVVNKWDGLSNEVREQVKETLDFRLGFIDFARVHFISALHG
SGVGNLFESVREAYDSSTHRQSTAMLTRIMNMAAEDHQPPLVRGRRVKLKYAHAGGYNPP
IVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGTPIRIQFKEGENPFANKRNTLTPNQMRK
RKRLIKHIKKGK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtacctgtggtcgcgcttgtcgggcgccctaacgttggaaaatccacgctgtttaac
cgtctgacgcgcacgcgagatgcgctggtcgcggatttcccgggtctgactcgtgaccgt
aagtacggtcgtgctgaagtggaaggccgcgagtttatctgtatcgataccggtggtatc
gatggcacggaagaaggcgtagaaacgcgcatggcggaacagtcgctgctggcgattgaa
gaagcggatgtcgtgttgtttatggttgatgcgcgtgccgggctgatgcctgcggacgaa
ggtatcgccaaacacctgcgttcacgcgaaaaggcgacgttcctcgttgctaacaaaacg
gatggcatcgacccggatcaggccgttgcggatttctggtccctgggcctcggtgaaatc
cacgcgattgctgcgtctcacggccgtggcgtcaccagcctgattgaacacgcgctgctg
ccatttatggacgaagttgcgccggttgaagaagtcgacgaagacgcgctgtactgggct
cagttcgaagcagaacagaatggcgtaccgattgaagagccggaagatgatttcgacccg
cgcagcctgccaattaaactcgctatcgttggtcgtccgaacgtcggtaagtcaacgcta
actaaccgtattctcggtgaagaccgcgtcgtggtttacgacatgccgggcaccacgcgt
gacagcatctacatcccgatggaacgcgatgagcgtgaatatatcctcatcgataccgct
ggggtacgtaagcgcggcaaaatcaccgataccgtagaaaagttctcggttatcaaaacg
ctgcaggcgattgaagacgccaacgtggtgatgctggtcatcgatgcccgcgaaggcatt
tccgatcaagacctctcgctgctcggcttcatcctcaatagtgggcgctcactggttatc
gtggtcaacaaatgggatggcctgagcaacgaagtgagagagcaggttaaagaaaccctc
gacttccgtctgggctttattgatttcgcccgcgtgcacttcatttctgctctgcacggt
agcggcgtaggcaacctgttcgagtccgtgcgcgaagcttacgacagctccacgcatcgt
cagagcaccgcgatgctgacccgcatcatgaacatggctgcggaagatcaccagccgccg
ctggttcgtggtcgtcgcgtgaagctgaaatatgcgcacgctggcggttataacccgccg
attgtggttatccacggtaaccaggtgaaagacctgcctgattcctacaagcgctacctg
atgaactacttccgtaaatcactggaagtcatggggacgccaatccgtattcagttcaag
gaaggggaaaacccgttcgcgaacaagcgtaataccctgacgccgaaccagatgcgtaag
cgtaagcgtctgatcaagcacattaaaaaaggtaagtaa
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