Scandinavium goeteborgense: A8O29_007140
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Entry
A8O29_007140 CDS
T06630
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgoe03016
]
A8O29_007140 (rnz)
Enzymes [BR:
sgoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
A8O29_007140 (rnz)
Transfer RNA biogenesis [BR:
sgoe03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
A8O29_007140 (rnz)
Prokaryotic type
A8O29_007140 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QKN81066
LinkDB
All DBs
Position
complement(1326693..1327613)
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AA seq
306 aa
AA seq
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MELIFLGTSAGVPTRHRNMTSILLNLQQPTLSQMWLFDCGEGTQHQFLKTSHHPGKLDKI
FITHLHGDHLFGLPGLLCSRSMQGNPSPLTIYGPKGIKEFVEMALRLSGSWTDYPLTVEE
ISAGEVFDDGLFKVTAYPLNHPVECYGYRIEQHDKPGPLDAQRLLADGIKAGPLFQQLKK
GQTVEMPDGRIVNGQDYLGPSTPGVKLAIFGDTAPCPAALAMAKEVDVMVHETTLEHEMA
EKANSRGHSSSIQTAELARDAHVGKLIITHVSSRYDWEGCQRLLAECRSVFEPCELAEDF
RVFPLA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatttttctcgggacatccgcaggcgtaccgactcgtcaccgtaatatgacg
tcgatactgctgaatttgcaacaaccgacgctgtcgcaaatgtggctgtttgactgtggc
gaaggtacgcaacaccagtttctcaaaaccagccatcatccgggaaagctcgataaaatt
tttatcactcacctgcacggcgaccatttattcgggctgccgggcctgttgtgcagccgt
tcgatgcagggcaatccgtcgccgctgacgatttatggcccaaagggcattaaagaattt
gtcgaaatggcgctgcgcctgagcggttcatggaccgattatccgctgaccgtcgaagaa
atcagcgccggtgaggtgtttgacgatggcctgtttaaggtcaccgcgtatccgctcaat
catccggtggaatgctatggctaccgcattgagcaacacgacaaacccggcccgctcgac
gcccagcgcctgctggccgacggcattaaagccgggccgctgttccagcagttgaaaaaa
ggccagacggtcgagatgccggacgggcgtattgtgaacggtcaggattatttgggaccc
agtacgcccggcgtaaaactggcaattttcggtgataccgccccctgcccggctgcgctg
gcgatggcgaaagaggtggatgtgatggtgcatgaaaccacgctcgaacacgagatggcg
gaaaaagcgaacagccgcgggcactcttcgtcgattcagaccgctgaactggcgcgcgat
gcccacgtcggcaaattgattattacgcacgtgagttcacgttatgactgggaaggctgt
cagcgcctgctggcagagtgtcgaagcgtatttgagccgtgcgaactggccgaggatttc
cgcgtgttccctttggcttaa
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