Scandinavium goeteborgense: A8O29_007960
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Entry
A8O29_007960 CDS
T06630
Symbol
alkA
Name
(Genbank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A8O29_007960 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_007960 (alkA)
Enzymes [BR:
sgoe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
A8O29_007960 (alkA)
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A8O29_007960 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QKN81219
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All DBs
Position
1518023..1518865
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AA seq
280 aa
AA seq
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MFILPWQAPYDWAWMFGFLAGRTVEGVERFDNQTYTRSFSLNGHHGLMRATPDLTTQTLV
VTLSDGLLPVKDQCLQRLEQLFDLRCEPQQVSAALGELAAARPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTSRVAKAYGTPLEEAPEFTCFPTPQQLVVADPLALKALGMPVKRAE
ALIHLAQAAISGELPLLPPHDVEAAMKTLQTFPGIGRWTANYYALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWQPWRSYALLHIWYSDGFQPG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgttcattttaccctggcaagcaccttatgactgggcctggatgttcggctttctggca
gggcgtaccgtagagggcgttgagcgctttgacaatcaaacctatacccgcagtttttcg
ttgaacggtcatcatgggctgatgcgtgccacgcccgatcttacgacgcagacgctggtg
gtcactctttccgatgggctgttgccggttaaagatcagtgtctgcaacggcttgagcaa
cttttcgatttgcgctgcgaaccgcagcaggtgtcggcggcgttgggtgaactggccgcc
gcgcgaccgggtctgcgtctgccgggctgtgtcgatgcctttgaacagggtgtgcgggcg
attcttggacagttagtgagcgtggcgatggccgcgaagctgacaagtcgggtggcgaaa
gcctacggcacgccgcttgaagaagcgccggaatttacctgtttcccgacgccgcagcag
ctggtggttgccgatccgctggcgttaaaagcgctggggatgccggtaaaacgcgccgaa
gccttgatacatctggcgcaggccgccatttcaggtgagctgccgttattgccgcctcac
gatgtggaagcggcaatgaaaacgttgcaaacgtttcccggtattggccgctggaccgcc
aactactatgcgttgcgcggctggcaggccaaggacgttttcctgccggacgactacctg
attaagcagcgcttccccggcatgacgcctgcgcaaatccgccgatatgcggagcgctgg
cagccctggcgctcctacgcgttgctgcacatctggtacagcgacggttttcagccgggc
taa
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