Scandinavium goeteborgense: A8O29_008250
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Entry
A8O29_008250 CDS
T06630
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00550
Peptidoglycan biosynthesis
sgoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A8O29_008250 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgoe01002
]
A8O29_008250 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgoe01011
]
A8O29_008250 (dacD)
Enzymes [BR:
sgoe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A8O29_008250 (dacD)
Peptidases and inhibitors [BR:
sgoe01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
A8O29_008250 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sgoe01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
A8O29_008250 (dacD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CDPS
DUF3090
Motif
Other DBs
NCBI-ProteinID:
QKN81272
LinkDB
All DBs
Position
1585461..1586627
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AA seq
388 aa
AA seq
DB search
MKGRFFIAVSLLASSVSCAVAADYISAPVQPPAIQAASWVLMDYTTGQVLTAGNEHQQRN
PASLTKLMTGYVVDRAIDSHRITGDDMVTVGRDAWAKGNPVFDGSSLMFLKAGDRLSVHD
LSRGLIVDSGNDACVALADYVAGGQPQFVKMMNDYVSKLGLKDTHFETVHGLDAPGQHSS
AFDLAVLSRAIIHGEPDFYHMYSEKSLTWNGITQNNRNGLLWDKNLNVDGLKTGHTATAG
FNIIASAVDGKRRLIAVVMGAESSKGREDQARKLLHWGQQNFDTVQILHTGKKVGTERIW
YGDKEHIDLGTDQDFWLALPKAEVPKIKAKYVMDKKELDAPIEAHQRVGEIELYDGDKIV
AHWPLVTLESVGKGGMFSRLSDWMHHKS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggccgtttttttattgctgtttctttgctcgcttcgagcgtttcttgcgcagtt
gccgcagattatatttccgcaccggtacaacctcctgcaatccaggccgcatcctgggtg
ctgatggattacaccaccggacaggtcctcaccgcgggtaacgaacaccagcagcgcaac
cctgccagtctcacaaagctgatgaccggttacgtggttgaccgcgcgatcgacagccat
cgcattaccggagatgacatggtcaccgtgggtcgcgatgcctgggcgaagggcaaccct
gtgtttgacgggtcatccctgatgttcctcaaagcgggcgatcgactgagcgtgcatgac
ctgagccgcgggctgattgtcgattccgggaacgacgcctgcgtggcgttggctgactac
gtcgcaggtggccagccacagttcgtcaaaatgatgaacgattacgtgagcaaactgggc
ctgaaagatacccatttcgaaaccgtgcacggtcttgatgcgccaggacagcacagttca
gccttcgacctggcggtgttatcccgggcgattattcatggcgagcctgacttctatcat
atgtatagcgagaagagcctgacctggaacggcattacccagaacaaccgtaacggcttg
ctgtgggataaaaatctgaacgtcgatgggctgaaaacgggccacacggcgactgccggg
tttaacatcatcgcctctgcggtcgacggtaagcgtcgtctgattgcggttgtcatgggc
gctgagagctcgaaagggcgtgaagatcaggcgcgtaaactgctgcactggggccagcag
aatttcgatactgtgcagatcctgcataccggcaaaaaagtcggtacagagcgcatctgg
tacggtgataaagaacacatcgatctgggcaccgatcaggacttctggctggccttaccg
aaagccgaagtgccgaaaatcaaagccaaatacgtgatggacaagaaagagctggatgcg
ccaatcgaggcccatcagcgcgtcggggaaattgaactctacgacggcgataagattgtg
gctcactggccgctggtgacgctggaaagcgtgggcaaaggcggcatgttctcgcgcctg
agcgactggatgcaccacaaatcctga
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