Scandinavium goeteborgense: A8O29_008390
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Entry
A8O29_008390 CDS
T06630
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_008390
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
A8O29_008390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QKN81293
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All DBs
Position
1612962..1613456
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AA seq
164 aa
AA seq
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MADVHNPATRSKNMRAIGTQNTAIEKRLAALLNDAGFDYTVQDATLPGRPDFVLSGYRCI
LFTHGCFWHHHDCYLFKVPETRTEFWLQKIGKNVARDARDIALLQDLGWRVLVVWECALR
GKLKLSDAALTERLEEWICGGEGSAQIDTQGIAPLAVTSPARKA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttcataaccccgccacccgaagcaaaaatatgcgtgccatcggcacgcag
aataccgccattgaaaaacgcctggccgcattactgaacgatgccggtttcgactacacc
gttcaggatgcaaccttgcccggtcgccccgactttgtcctctctgggtatcgctgcatt
ctcttcacccacggctgtttctggcatcatcacgactgctacctgtttaaagttcccgaa
acgcggaccgaattctggctgcaaaaaataggcaaaaatgtggcgcgggatgcacgagat
attgcgctgctccaggatctaggttggcgagtgctggtggtctgggaatgtgcgctgcga
ggaaaactgaaactcagtgatgcggcgttaacggagaggctggaggagtggatctgcggc
ggcgaaggcagcgcgcagatcgacactcagggcattgcgccgttggcggttacttctcca
gctcgcaaggcgtag
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