Scandinavium goeteborgense: A8O29_012070
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Entry
A8O29_012070 CDS
T06630
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A8O29_012070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_012070
Transporters [BR:
sgoe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A8O29_012070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKN81983
LinkDB
All DBs
Position
complement(2346352..2347368)
Genome browser
AA seq
338 aa
AA seq
DB search
MTYAVEFQDVSRLYGDVRAVDGVSISIEDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA
IKIFGKEASVLPPWQRDVNTVFQDYALFPHMSILDNVAYGLMVKGIGKKQRHAMAQEALE
KVALGFVHTRKPSQLSGGQRQRVAIARALVNQPRVLLLDEPLGALDLKLREQMQFELKKL
QQDLGITFIFVTHDQGEALSMSDRVAVFNNGGIEQVDTPRELYLRPRTPFVASFVGTSNV
FDSAQTLKLCGMTGQWSLRPEHIRLDAGGDIQVNGVVQAVQYQGAATRYEIRLSGGEKLL
VSQGNFTGGIVPAGPTPGQNVLASWSREAMVPLDGGVR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgcagttgaatttcaggatgtttcgcgtctgtacggtgatgttcgtgcggtg
gatggcgtcagtatctccatcgaagatggggagtttttttcaatgctggggccttcaggc
tccggcaaaaccacctgcctgcggttgatcgccgggttcgaacagctttccggcggcgcc
atcaaaatcttcgggaaagaagctagcgttttgccgccgtggcagcgcgacgtcaacacc
gtattccaggattacgcgctgtttccgcatatgtcgattctcgacaacgtcgcctacggg
ctgatggtgaaaggtatcggcaagaaacagcgtcacgcgatggcccaggaagcgctggaa
aaagtggcgctcggttttgtgcatacccgtaagccgtcgcagctttccggcggccagcgt
cagcgcgtggccattgcccgggcgctggtcaatcagccgcgcgtgctgctgctcgatgaa
ccgcttggcgcgctggatctcaagctgcgcgaacagatgcaattcgagctgaaaaagctg
caacaggatttgggtatcacctttatttttgtcacccacgatcagggcgaagcgctgtcg
atgtctgaccgcgtggcggtgtttaacaacggtggcattgagcaggtcgacaccccgcgc
gagctgtatctgcgcccgcgcacgccgttcgtcgccagttttgtcggcacttcaaacgtt
tttgattccgcgcaaaccctgaagctgtgcggcatgaccggacaatggtcactgcgcccg
gagcatattcggcttgatgcgggaggcgatattcaggtcaacggcgtggtgcaggcagtg
cagtatcagggcgcggcgacccgctatgaaattcggttatccggtggtgaaaagctgctg
gtgagtcaggggaatttcaccgggggcatcgtgcctgctggcccgacgccgggccagaac
gtgctggcatcgtggtcgcgggaggccatggtcccgctggacggaggggtgagatga
DBGET
integrated database retrieval system
