Scandinavium goeteborgense: A8O29_013040
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Entry
A8O29_013040 CDS
T06630
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
A8O29_013040 (lapB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_2
TPR_16
Zn_ribbon_LapB
TPR_8
TPR_1
TPR_12
TPR_6
ARM_TT21_5th
ANAPC3
ARM_TT21_N
TPR_11
TPR_9
TPR_CcmH_CycH
ARM_TT21
TPR_20
HAT_Syf1_CNRKL1_C
TPR_21
ARM_TT21_C
HrpB1_HrpK
SPG48
T4SS_TraI
BAR_4
Motif
Other DBs
NCBI-ProteinID:
QKN82166
LinkDB
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Position
complement(2537211..2538380)
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AA seq
389 aa
AA seq
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MLELLFLLLPVAAAYGWYMGRRSAQQSKQDDASRLSRDYVAGVNFLLSNQQDKAVDLFLD
MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAA
GLYDRAEDMFSQLVDETEFRISALQQLLQIYQATSDWQKAIDVAERLVKLGKEKHRPEIA
HFWCELALQQMGNSDMDKAMSLLKKGAAADRNSARVSIMMGRVFMANGDYGKAVESLQRV
IDQDRELVSETLEMLQTCYQQLGKDEEWEHFLRRAVEENTGAAAELMLAQIMEQREGADT
AQTYVTRQLQRHPTMRVFHKLMDYHLNEAEEGRAKDSLMVLRDMVGEQVRSKPRYRCQKC
GFTAYTLYWHCPSCRAWSSVKPIRGLDGQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttgttgtttctgcttttgcccgtcgccgccgcgtatggctggtacatgggc
cgcaggagtgcacaacagtccaaacaggacgatgctagccgcctctcccgtgattacgtc
gcgggcgtaaacttcctgctcagcaatcagcaggacaaagcggtggacctgttcctcgac
atgcttaaagaggataccggcaccgtcgaggcgcacctgacgctcggcaacctgttccgt
tcgcgtggtgaagtcgaccgcgctatccgcattcaccaaaccttgatggaaagcgcctcg
ctgacctacgaccagcgcttgctggcggtgcaacagctgggccgtgactacatggctgcg
ggcctctatgaccgcgcagaagacatgttcagccagctggtggatgaaactgaattccgc
atcagcgcgcttcagcagctgctgcaaatttatcaggcgaccagcgactggcaaaaagcc
atcgacgttgcggagcgtctggtcaaactcggtaaagaaaaacaccggcctgaaatagcc
cacttctggtgcgaactggccctgcagcaaatgggcaacagcgacatggataaagccatg
tcgttgcttaaaaagggtgccgccgccgatcgcaacagcgctcgcgtgtctatcatgatg
ggccgggtgttcatggccaacggtgattatggcaaagcggtggaatcactgcagcgggtt
atcgatcaggaccgcgaactggtcagcgaaaccctggaaatgctgcaaacctgctatcag
cagctcggcaaagacgaagagtgggaacacttcctgcgtcgcgcggtggaagagaacacc
ggtgccgccgccgagctgatgttggcgcaaatcatggaacagcgcgaaggcgctgatacc
gcacaaacctacgtcacccgccagcttcagcgccatccgaccatgcgagtgttccataag
ttaatggattatcacctcaatgaagcggaagaagggcgcgcgaaagacagcctgatggtg
ctgcgtgacatggttggcgaacaggtgcgcagtaaaccgcgctatcgttgccagaaatgt
ggcttcacggcctacaccctctactggcactgtccttcctgccgggcctggtcctcggtc
aaacctattcgcggcctcgacggccagtaa
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