Scandinavium goeteborgense: A8O29_013370
Help
Entry
A8O29_013370 CDS
T06630
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgoe03032
]
A8O29_013370 (topA)
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_013370 (topA)
Enzymes [BR:
sgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A8O29_013370 (topA)
DNA replication proteins [BR:
sgoe03032
]
Prokaryotic type
DNA Topoisomerases
A8O29_013370 (topA)
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A8O29_013370 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
MetOD1
Motif
Other DBs
NCBI-ProteinID:
QKN82226
LinkDB
All DBs
Position
complement(2592637..2595237)
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTAAKPAKKPK
KDERGALVNRMGVDPWHDWAAQYEVLPGKEKVVAELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDSRYSRVVFNEITKNAIRQAFDTPGELNIDRVNAQQARRFVDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEIDANTATPSGDALPLEVSH
HHDKPFRPVTRDETMAAVSQLEKARYSVLDREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRDYIGENFGKKYLPENANQYASKEN
SQEAHEAIRPSDVAVVAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
KLKARGRTLRFDGWTKVMPALRKGDEDRTLPPVKKGEELTLVELLPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVESRRFYAEKMGEIVTDRLEDNFRELMNY
DFTAQMESSLDQVANHQAEWKQVLNDFFGDFTRQLETAEKDPEEGGMQPNPMIMTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCVKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDDCKNTRKILRNGEVAPPKEDPTPLPELQCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQEDGQGNKTMVRFSRKTKQQYV
SSEKDGKATGWSAFFIDGKWQEVAKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtac
ctgggtaatgactacgtggtgaaatccagcgtgggtcatatccgtgatctgccgaccagt
ggctcagcaagcaaaaagagcgccgactctaccgccgccaaaccggccaaaaagccgaaa
aaggatgaacgcggtgcgcttgtaaaccgcatgggcgttgatccgtggcacgactgggct
gcccagtatgaagtgctgccaggtaaagaaaaggttgtcgctgaactcaaacagttagct
gaaaaagctgaccatatctatctcgcaactgaccttgaccgcgaaggggaggccattgca
tggcacctgcgggaagtgatcgggggtgatgactcacgctatagccgcgtggtgtttaac
gagataaccaagaatgcgattcgtcaggcgtttgacacgccgggtgaactgaatatcgat
cgtgtaaacgctcagcaggcgcgtcgtttcgtcgaccgcgtggtgggttacatggtctct
ccgctgctgtggaaaaagattgcccgtggcctgtcagcaggacgtgtacagtctgttgcg
gtacgtctggtcgtcgagcgtgaacgcgaaattaaagcgttcgtcccggaagagtactgg
gaaattgacgccaacaccgcgacgccatcaggcgacgcgctgccgctggaagtcagccat
catcacgataagccgttccgtccggtaacccgtgacgaaaccatggccgccgttagccag
cttgaaaaagcgcgctacagcgtactcgatcgtgaagataagccgaccagcagcaagccg
ggcgcgccgttcatcacctccacgcttcagcaggcggcaagtacccgtctcggctacggc
gtgaagaaaaccatgatgatggctcagcgtctgtatgaagcaggtcacatcacttatatg
cgtaccgactccactaacctgagtcaggacgcggtaagcatggttcgcgactacattggc
gaaaacttcggtaagaaatatctgccggaaaacgccaatcagtacgccagcaaagagaat
tcacaggaagcgcacgaagccattcgtccttctgatgtcgcggttgtggccgagtctctg
aaagacatggaagctgacgcgcagaaactgtatcaactgatctggcgccagtttgtggcg
tgccagatgacgccagcacagtacgattccaccacgctgaccgtaggcgccggtgatttc
aaactgaaagcacggggtcgtacgctgcgcttcgacggctggacgaaagtcatgcctgcg
ctgcgtaaaggcgacgaagaccgtacgctgccgccagtgaaaaaaggcgaagagctgact
ctggttgagctgcttcctgctcagcactttaccaagccgccagcgcgattcagcgaagcg
tctttggttaaagaactggaaaaacgtggcatcggccgtccgtctacctatgcgtcgatc
atttcgaccattcaggatcgtggctatgttcgcgttgaaagccgtcgtttctacgccgag
aaaatgggcgagatcgtcaccgatcgtctggaagataacttccgcgagctgatgaactac
gacttcaccgcgcagatggaaagcagcctcgaccaggtcgcaaaccatcaagccgagtgg
aagcaggttctgaacgacttcttcggcgactttactcgtcagctcgaaacggcggagaaa
gatccggaagaaggcggtatgcagcctaacccgatgatcatgaccagcatcgactgccca
acctgtggccgtaagatgggtatccgtaccgcgagcaccggcgtgttcctgggctgttcc
ggctatgcgttaccgccgaaagagcgttgcaaaaccaccattaacctggtgccggaaaac
gaagtcctgaacgtgctggaaggcgacgacgcggaaaccaacgcgctgcgtgctaaacgc
cgttgtgtcaaatgcggcacggcgatggacagctaccttatcgatccgaaacgtaagctg
cacgtctgtggtaacaacccgacctgcgacggttacgaaatcgaagaaggcgagttccgc
atcaagggctatgacggcccaatcgttgagtgtgaaaaatgtggttctgaaatgcacctg
aaaatgggacgttttggtaagtacatggcctgtaccaacgacgattgcaagaatacccgt
aagatcctgcgtaacggtgaagttgcgccgccgaaggaagatccgactccgctgccagaa
ctgcagtgtgagaaatcagatgcgtacttcgtgctgcgtgatggcgctgcgggcgtgttc
ctggcggcgaataccttccctaaatcgcgtgaaacacgtgcgccgttagtggaagaactg
taccgcttccgtgaccgtctgccggaaaaactgcgctatctggcagatgctccgcaggaa
gacggccagggtaacaagaccatggtgcgtttcagccgcaaaacgaagcagcagtatgtg
tcttctgaaaaagacggcaaagcgaccggttggtccgccttctttatcgacggcaagtgg
caggaagtcgcgaagaagtaa
DBGET
integrated database retrieval system
