Scandinavium goeteborgense: A8O29_014975
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Entry
A8O29_014975 CDS
T06630
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A8O29_014975 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_014975 (msbA)
Enzymes [BR:
sgoe01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
A8O29_014975 (msbA)
Transporters [BR:
sgoe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
A8O29_014975 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_16
DEAD
Zeta_toxin
APS_kinase
RsgA_GTPase
AAA_29
AAA_22
nSTAND3
HUTI_composite_bact
Activator-TraM
MMR_HSR1
AAA_25
AAA_30
AAA_24
NB-ARC
AAA_18
AAA_15
ABC_membrane_2
Motif
Other DBs
NCBI-ProteinID:
QKN82525
LinkDB
All DBs
Position
complement(2924155..2925903)
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AA seq
582 aa
AA seq
DB search
MQNDKDLSTWQTFRRLWPTIAPFKAGLIVAAVALVLNAASDTFMLSLLKPLLDDGFGKTD
RSVLLWMPLVVIGLMILRGVTSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS
TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFIMMFWYSWQLSVILIVLAPIVSF
AIRHVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLMFGGQGVETKRFDKVSNKMRLQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFAILDSEQEKDEGTRVVERAKGNLEFKDVTFTYPGREVPALR
DINLSVPEGKTVALVGRSGSGKSTIASLITRFYDVDTGNIVLDGHDIREYTLASLRDQVA
LVSQSVHLFNDTVANNIAYARTDLYSREDIERAATMAYAMDFINKMDNGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGRIVERGSHQDLLEHRGVYAQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgacaaagatctctccacgtggcagactttccgccgactttggccaacgata
gcgccttttaaagctggccttatcgtggctgcagtcgcattggttcttaacgctgccagt
gacacctttatgctgtcgcttcttaaaccgttactggatgatggttttgggaaaacggac
cgctcagtgctgctgtggatgccgctggtggtcatcggattgatgatcctccgtggtgtg
accagctacgtatcaagctactgtatttcctgggtttcaggcaaagtggtcatgaccatg
cgccgtcgccttttcggccatatgatggggatgccggtctcgtttttcgacaaacagtcc
accggtactttgctgtcacgtatcacctatgactccgaacaggttgcttcgtcctcttcc
agcgcattgattactgtcgtgcgtgaaggggcatcgattattggcctgttcatcatgatg
ttctggtacagctggcagctgtcggtgatcctgattgtactggcgccgatcgtctccttt
gctattcgccatgtgtccaagcgtttccgcagcatcagtaaaaatatgcaaaacacgatg
gggcaagtgaccaccagtgcggagcaaatgctgaaagggcataaagaagtcctgatgttt
ggcggccaaggcgtcgaaaccaagcgtttcgataaagtcagcaataaaatgcgtttgcag
ggtatgaagatggtttcagcttcttctatctctgacccaatcattcagctgattgcctcc
ctggcgctggcctttgtactttacgcggcgagcttcccaagcgtcatggaaacgttgacc
gcaggtaccatcaccgtcgtgttctcttcaatgattgcgttaatgcgtccgctgaagtct
ctgaccaacgtcaatgcccagttccagcgcggtatggcggcctgtcagacgctgttcgct
atccttgatagtgagcaggaaaaagacgaaggtacccgcgttgttgaacgtgcgaagggt
aatctcgaatttaaagacgtcacctttacgtatcctggccgtgaagtgcctgcgctgcgc
gacattaatctgagtgttcctgaagggaagactgtcgcactggtgggacgttccggttcg
ggtaagtccaccatcgcgagtctgattacgcgtttctatgatgtggataccggcaacatt
gtgctcgatggacacgatatccgcgaatacaccctggcatcgctgcgcgaccaggtggcg
ctggtttcacagagcgtgcatctgttcaacgataccgtggcgaataatattgcctacgcc
cggaccgacctttacagccgtgaagatattgagcgggccgcgacaatggcttacgccatg
gacttcatcaataagatggataacggtctggatacggtgattggtgagaatggcgtgctg
ctttccggcggtcagcgtcagcgtatcgcgattgcccgtgcgctgctgcgtgacagcccg
atcctgattctggatgaagcgacgtcagccctggataccgagtccgaacgtgccattcag
gccgcgctggatgaactgcagaaaaaccgtacctctctggtgatcgctcaccgtctgtcc
accattgaaaaagccgatgaaattgtcgtcgttgaagatgggcgtatcgttgagcgtggt
agccaccaggatctgctggaacatcgcggcgtctatgctcagctgcataaaatgcaattt
gggcaatga
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