Scandinavium goeteborgense: A8O29_016060
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Entry
A8O29_016060 CDS
T06630
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00020
Citrate cycle (TCA cycle)
sgoe00190
Oxidative phosphorylation
sgoe00650
Butanoate metabolism
sgoe00720
Other carbon fixation pathways
sgoe01100
Metabolic pathways
sgoe01110
Biosynthesis of secondary metabolites
sgoe01120
Microbial metabolism in diverse environments
sgoe01200
Carbon metabolism
Module
sgoe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sgoe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sgoe_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A8O29_016060 (sdhA)
00650 Butanoate metabolism
A8O29_016060 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
A8O29_016060 (sdhA)
00720 Other carbon fixation pathways
A8O29_016060 (sdhA)
Enzymes [BR:
sgoe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
A8O29_016060 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
QKN82730
LinkDB
All DBs
Position
complement(3161590..3163356)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNQDGAVVGC
TALCIETGEVVYFKANATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ
ESIAEQGALRDANESDIDASLERLNRWNNTRSGEDPVEIRKALQECMQHNFSVFREGDAM
AKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAFATAVSANFRTESRGAH
SRFDFPERDDANWLCHSLYQPQSESMTRREVNMEPKLRPAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccagtcagagaatttgatgctgttgtaatcggagcaggtggtgcaggcatg
cgtgccgcactgcaaatttcccagagcggccagacctgtgcgctgctctctaaagtcttc
ccgacccgttcccataccgtgtcagcgcagggtggtatcaccgtcgcgctcggtaacacc
catgaagataactgggaatggcacatgtatgacaccgtaaaagggtcagactacatcggt
gaccaggacgctatcgaatatatgtgtaaaaccggcccggaagcgattctggagctggaa
catatgggtctgccattctcccgtctggatgatggcactatttatcaacgtccgtttggc
ggccagtcgaaaaacttcggcggcgagcaggcggcacgtaccgcagcggcggctgaccgt
accggtcacgcgctgttgcacacgctgtatcagcagaacctgaaaaacaaaaccaccatt
ttctccgagtggtatgcgctggatctggtgaaaaaccaggatggtgcggtggtcggttgt
accgcactgtgcatcgaaaccggtgaagtcgtgtacttcaaagccaatgccaccgtgctg
gcgaccggcggtgcaggccgtatttatcagtccacaaccaatgcgcacatcaacaccggt
gacggcgttgggatggcaatccgcgccggtgttccggtgcaggatatggaaatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggtgaccgaaggttgccgtggtgaa
ggcggttatctgctgaacaaacacggcgagcgtttcatggagcgctatgcgccgaacgcg
aaagacctggcgggtcgtgacgtggtggcacgttccatcatgatcgaaatccgtgaaggt
cgcggctgcgaaggcccgtggggtccgcatgccaaactaaaactcgatcaccttggcaaa
gacgtgctcgaatcccgtctgccgggcatcctcgaactgtcccgtacctttgcacacgtc
gacccgattaaagaaccgatcccggttatcccaacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggccaggcgctgaccgtgaacgagaagggcgaagatgttgtgatc
ccgggcctgttcgcggtgggcgaaatcgcttgtgtctccgtacacggtgccaaccgtctg
ggcggcaactcgctgctggacctggtggtatttggtcgtgctgctggcctgcatctgcaa
gaatccattgccgagcagggcgcgctgcgtgacgcaaacgaatctgacattgacgcttct
ctggaacgtctcaaccgctggaacaacacccgtagcggtgaagatccggtggaaatccgt
aaagcactgcaggaatgtatgcagcacaacttctcggtattccgtgaaggtgatgcgatg
gcaaaaggtctggaacagctgaaagtgatccgcgagcgcctgaaaaacgcccgtctggat
gacacctccagcgaattcaacacccagcgcgttgagtgtctggagttggataacctgatg
gaaacggccttcgccactgcggtatcggcaaacttccgtactgaaagccgtggcgcacac
agccgcttcgacttcccggaacgcgatgacgcaaactggctctgccactccctgtaccag
ccgcagtcggaatccatgacccgtcgtgaagtgaacatggaaccgaaactgcgtccggca
ttcccgccgaaagtgcgtacctactaa
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