Scandinavium goeteborgense: A8O29_016100
Help
Entry
A8O29_016100 CDS
T06630
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_016100 (phrB)
Enzymes [BR:
sgoe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A8O29_016100 (phrB)
DNA repair and recombination proteins [BR:
sgoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A8O29_016100 (phrB)
Prokaryotic type
A8O29_016100 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKN82738
LinkDB
All DBs
Position
complement(3170309..3171721)
Genome browser
AA seq
470 aa
AA seq
DB search
MTTHLVWFRTDLRLHDNLALAAACRDRQAKVIALFIATPQQWQQHLMAPRQAAFLQAQLN
ALQTQLAQKGIPLLFREVADFAASVEVVKNVCDAHHVDRLFYNYQYEINERQRDSRVEKT
LDTVTSQGFDDSVMLAPGSVMTGNHQMYKVFTPFKNAYLRRLKEGLPECVQAPGQRESGA
CETPEIALNLPQEPFDTALFPADEKTAINRLRHFCQQQAAEYEEKRDFPAIEGTSRLSAC
LTLGVLSPRQCLHRLLAECPQALDGGPGSVWLNELIWREFYRHLMTYHPELCRYKPFIAW
TDKVAWNYDRAALTAWQQGETGYPIVDAAMRQLNETGWMHNRLRMIVASFLVKDLLIDWR
EGERYFMSQLVDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKEGVFIRHWLP
ELNTVPEKAIHEPWLWAEKEGITLEYPRPIVNHKQARIETLAAYEAARKA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggtttcgcaccgatttacgcctgcacgacaatctggcgctg
gccgccgcctgtcgcgatcgccaggcgaaggtgattgcgctgtttattgccacaccgcag
cagtggcagcagcatcttatggcgccacggcaggcggcatttttgcaggcccagctaaac
gcgttgcaaacgcagttggcgcaaaaaggcattcctttgctgtttcgcgaagtggcagat
ttcgcggcgtcggtagaggtagtaaaaaatgtctgcgatgcgcaccacgtcgatcggctt
ttctataactatcaatatgaaattaacgagcgtcagcgcgacagtcgcgtggaaaaaacg
ttggatacggtgacgagtcagggttttgacgacagcgtgatgctggcacccggcagcgta
atgaccggcaatcatcagatgtataaggtttttacgccgtttaaaaatgcgtatctgcga
cggctaaaagaagggctgccggaatgcgttcaggctccgggtcagcgtgagagtggggcg
tgtgaaacgcctgagattgccctcaatcttcctcaggagccctttgataccgcgctgttc
ccggcggatgagaaaaccgccatcaacaggctgcgccacttctgccaacagcaggccgcg
gaatacgaagagaagcgagattttccggcgattgaaggcaccagtcggttatcggcgtgc
ctcacgttgggcgtgctgtctccgcgccagtgtctgcatcggcttctcgcggaatgtcca
caagcgttagacggcggccccggctcggtctggttaaatgaactcatctggcgtgaattt
taccgccatctgatgacctatcaccctgagttatgccgctataaaccgtttatcgcctgg
actgataaggtcgcgtggaactacgatcgtgcggcgttgaccgcatggcaacagggcgaa
acgggctacccgatcgttgatgcggcgatgcgtcagctcaatgaaacaggctggatgcac
aaccgcctgcggatgattgtcgccagcttcctggtgaaggatttgctgattgactggcgg
gaaggtgagcgttacttcatgtcgcaactggtagacggtgacttagcggccaataacggc
ggctggcagtgggcggcctcaacggggaccgatgccgcaccgtatttccgcatctttaat
ccgaccacccagggcgaacggtttgataaagaaggcgtgtttattcgtcactggctaccg
gaattgaatacggtgccggagaaagcgattcacgaaccgtggctgtgggcggaaaaagag
gggataacgctagaatatccgcgcccgattgtgaatcacaaacaggcgcggatagagacg
ctggcggcgtatgaagccgcccgtaaagcttaa
DBGET
integrated database retrieval system
