KEGG   Scandinavium goeteborgense: A8O29_017440
Entry
A8O29_017440      CDS       T06630                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
sgoe  Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:sgoe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sgoe02044]
    A8O29_017440 (tssC)
Secretion system [BR:sgoe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A8O29_017440 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QKN82986
LinkDB
Position
complement(3463819..3465369)
AA seq 516 aa
MLMSVNNESQVSTGGATIVKTLPNDGVYASLFSKINLKPVSSIDDLNGFDDNVVMAETSA
DARVTAAVKVFMQCLQKSSQQVEKLDKTLLDHHIAELDFQISRQLDEVMHHDEFQKVESI
WRGLKSLVDKTDFRQNVKLEILDLSKEELRQDFEDAPEIIQSGLYKQTYIAEYDTPGGEP
IAAVISAYEFDASAQDVALMRNISKVSAAAHMPFIGSAGPKFFLKEKMEEVAAIKDIGNY
FDRAEYIKWKSFRDTDDSRYLGLVMPRVLGRLPYGPDTVPVRSFNYIEEVKGPEHDKYLW
TNASFAFAANMVKSFINNGWCVQIRGPQAGGAVKDLPIHLYDLGTGNQVKIPSEVMIPET
REFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYDTADATANSRINSRLPYIFLLSRI
AHYLKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDELQASHPLRDAKVLVEDIE
DNPGFFRVKLFAIPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgcttatgtcagtcaataatgaatcccaggtatctacgggcggggcgactattgtaaaa
acgctgcctaacgacggtgtttacgcctctctgttctccaaaattaatttaaaaccggta
tcgtccatcgacgatcttaacggttttgacgataacgtcgtcatggctgaaacttctgct
gacgcgcgcgttaccgctgcggtcaaagtgttcatgcagtgcctgcaaaaatccagtcag
caggtcgagaagttggacaaaactctgctggatcatcacattgcggagctggatttccag
atcagccgccagctcgatgaggtgatgcaccacgacgagtttcagaaagtggagtccatc
tggcgtggcctgaaatcgctggtggataaaaccgacttccgccagaacgtgaagctggaa
atcctcgacctgtcgaaagaagaactgcgtcaggacttcgaagacgccccggaaatcatc
cagagcggcctgtacaagcagacttacatcgcggaatacgacaccccgggcggtgagccg
attgcggccgtgatttctgcctacgagttcgacgcctcggcgcaggacgtggcgctgatg
cgtaacatttccaaagtatccgctgcggcacacatgccgtttatcggttccgctggccct
aaattcttcctgaaagagaaaatggaagaagtggcggccatcaaggatatcggtaactac
ttcgaccgtgccgaatacatcaagtggaaatccttccgcgataccgacgactcccgctac
cttggcctggtcatgccgcgcgtgctgggccgcctgccgtatggcccggacaccgtgcca
gtgcgcagtttcaattacattgaagaagtgaaggggcctgaacacgacaaatatctgtgg
accaacgcctcgttcgcctttgccgccaacatggtgaaaagcttcatcaacaacggctgg
tgcgtgcaaattcgtggcccgcaggcgggtggcgcggtgaaagatctgccaatccacctt
tatgacctcggtaccggtaatcaggtgaagatcccgtcagaagtgatgattccggaaacc
cgcgaatttgaattcgccaacctcggctttatcccgctgtcgtactacaaaaatcgcgat
tacgcctgcttcttctcagcgaactctactcagaaaccggcactgtacgacactgctgat
gccaccgctaacagccggatcaactcccgcctgccatacattttcctgctgtcgcgtatc
gcgcactatctgaagttaattcagcgtgaaaacatcggcaccaccaaagaccgccgtttg
ctcgagctggagctcaacacttgggtccgcggtctggtgaccgaaatgaccgatccgggc
gacgaactgcaggcttctcacccgttgcgtgatgcgaaggtgttggttgaagacatcgaa
gacaacccgggcttcttccgcgtgaaactgttcgctatcccgcacttccaggtcgaaggc
atggatgtgaatctgtcgctggtttcccagatgccgaaagcgaaagcgtaa

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