Scandinavium goeteborgense: A8O29_018980
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Entry
A8O29_018980 CDS
T06630
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe02010
ABC transporters
sgoe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A8O29_018980
03070 Bacterial secretion system
A8O29_018980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_018980
02044 Secretion system [BR:
sgoe02044
]
A8O29_018980
Transporters [BR:
sgoe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
A8O29_018980
Secretion system [BR:
sgoe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
A8O29_018980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_29
PRK
ABC_ATPase
YkoA
AAA_18
Zeta_toxin
AAA_16
DUF6394
Motif
Other DBs
NCBI-ProteinID:
QKN83271
LinkDB
All DBs
Position
complement(3792910..3795018)
Genome browser
AA seq
702 aa
AA seq
DB search
MISSDQHIWRCFSLIARHYGMAVNVLALQEKYAPDNHHNIKIQFVRGVRETGLKCRCVES
VNITAVKKMPLPAVIELPEMGYVILLAIKDDEWLIQPVNNNKPIIFNPVEDECYQLFLFA
RRFSWGEIKSEFNLSWFANAFWHYKKLIGEVLLASFFIQVLALISPLFFQVVVDKVLTHQ
SLTTLDVLALGMVVVSLFDVILNGLRNYQLAHTSQRIDVTLSSLLYKHLLALPLTWFMQR
QAGVIVARVHELKTVREFLTGSAMSLCLDLFFTLIFFIAMVFYSIPLTLIVIVSLIPYIL
LSMSITPILRERLDEQFKQGARNQAFLVESLTGIESVKAMSVENLMNRRWDEQVAAFVTS
CFKTQNIGNIAGQISKFVSKITSVAILWYGAHQVIEAQLTVGALIAFNMFAGQVTAPVLR
LVQLWQDFQQVSVSVRRLGDILNMPVEHQECTATLAEVKGAIKFSKVSFSWQVGGSPVLD
NISLTIRPREIIGIAGRSGSGKSTLTRLIQRLCIPTSGQIYIDGIDIAQTDPHWLRKQIG
VVLQETQLFNGTIRDNIALALPEASLEQVVEVAKLAGAHEFISEFPQGYDTPVGEHGGRL
SGGQKQRVGIARALITNPRIIIFDEATSALDYESEYIIQRNMAEISRDRTVFIIAHRLSA
LRTAGRILVMEKGKIAEQGSHKQLLELKGVYSRLHDLQESSV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgatttcttcagatcaacacatatggcgttgcttttcgcttatcgcccgccattacgga
atggcagtaaatgttctggcattgcaggaaaaatatgcgccggataatcatcataatata
aagattcaattcgttcgtggcgtacgtgaaacgggtttaaaatgccgttgtgtagaaagt
gtgaacataactgccgtaaaaaagatgccacttcccgccgtaatagagttgccggaaatg
ggttatgtaatattattggcgataaaagatgatgagtggttaatccaacctgtaaataat
aataagccaataatatttaatccagtcgaagatgagtgctatcaattattcctttttgcg
cgccgtttttcttggggggagatcaaaagcgagttcaatctgagctggttcgcaaacgca
ttttggcattataaaaaactcatcggtgaggttttgctggcatcgttctttatacaagtc
ctggctttaatctctcctctattcttccaggtggtggtcgataaggttcttactcatcaa
agtctgacgaccttagacgtactggcgctgggtatggttgtagtttcactgttcgatgtt
attttaaacgggttacgtaattaccagcttgctcatacatcccagcgcatcgacgtaacg
ctaagctcattgctttataagcatttactggcattaccattgacgtggttcatgcaacgt
caagccggagttatcgttgcacgggtccatgaacttaaaacggtcagagagtttttaacg
ggcagcgcaatgtccttatgtcttgatttatttttcacgttaatattttttatcgcgatg
gtgttttacagtattcccctaacactgatcgttattgtctctctgattccctatatatta
ctgtcgatgtcaattactccgatattacgggagcgtctggacgagcagtttaaacagggt
gcgaggaatcaggcttttctggtagaaagcctgacgggtatcgagtcggtaaaagccatg
tcggtagaaaatttaatgaaccgccgctgggatgagcaagttgcggcgttcgttaccagt
tgttttaaaacgcaaaatattgggaatatagccggtcagatatctaagttcgtgagtaaa
attaccagtgtagcgattctctggtatggcgcacaccaggttattgaagctcaactgact
gtgggcgcgttaattgcttttaatatgtttgcagggcaggtgactgcaccagtattacgt
ctggtacaactatggcaagattttcaacaagtctctgtatccgtcaggagacttggggat
atattgaatatgcccgttgaacatcaggagtgtacggcgaccctggctgaagtgaaggga
gctataaagttttctaaggtgtctttttcttggcaagtgggtggttcacccgtcctggac
aatatttctttaacaatacgtccaagagagattattggtattgcagggcgttcaggttca
gggaaaagcacgctgacgcgacttatacaacgcttatgtattccgacgagcggtcaaata
tatatcgatgggatagatattgcgcaaactgaccctcattggctaagaaagcagatagga
gtcgtccttcaggaaacacaactatttaatggcaccatacgcgataatattgcgctcgcc
ttgccagaagcctctcttgagcaggttgttgaggtggctaaactcgcgggggcgcatgaa
tttattagcgagtttccgcaaggttatgatacgccagtgggcgaacacggcgggcgcctt
tctggtggccagaaacagagagtcggcatcgcaagagcgttaattacaaatccgcggatc
atcatatttgatgaggcaaccagcgcgttggattatgaatctgaatacattatacaacgc
aacatggctgaaatttctcgcgatcgtaccgtgtttattatcgcacatcgtttatcagct
ttacgcaccgcgggccgaattttggttatggaaaaagggaaaatagccgagcaaggcagc
cataaacaattactggaactcaaaggtgtctactccaggctgcacgaccttcaggagtcc
agtgtatga
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