Scandinavium goeteborgense: A8O29_020220
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Entry
A8O29_020220 CDS
T06630
Symbol
tamB
Name
(GenBank) autotransporter assembly complex protein TamB
KO
K09800
translocation and assembly module TamB
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_020220 (tamB)
Transporters [BR:
sgoe02000
]
Other transporters
Pores ion channels [TC:
1
]
A8O29_020220 (tamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QKN83505
LinkDB
All DBs
Position
complement(4073261..4077037)
Genome browser
AA seq
1258 aa
AA seq
DB search
MSLWKKISLGVLVFIILLLGTVAFLVGTTTGLHLVFKAADRWVPGLSIGQVVGGWKDLTV
KNLRYQQPGVAVDAGQFHLAVNTSCLWNSSLCVNDLSLANVNVAIDSKKMPPSAPAVEED
SGPLNLSTPYPITLSRVALNNINIKIDDTTVSVMDFTSGLNWQEKNLTLTPTSLRGLLIA
LPKVAKVAQEQVIEPKIDKPKPDEKPLGETMKDLFSKPVLPEMTDVHLPLNLNIQEFRGE
QLRLTGDTDLTVYTLLLKVSSIDGNMKLDALDVDSSQGTVNATGTAKLQDDWPVDLTLNS
TLNIDPVKGEKIKMKIGGDVRKQLDVGINLSGPVDVGIRAQAQLAEAGLPLNLEVLSKQL
YWPFTGEKQYQADNVKLKLSGKMTDYTLSFATAVKGQGLPPATITLDAKGNEQQVNLDKL
TIAALEGKTELKALLDWQQAISWRGELKLDGINTAKEVPDWPAKLNGLIKTSGSLYGGSW
QVDVPELKLTGNVKQNKVNVDGKLSGNSYLQWKIPGLHLELGRNSADVKGELGVKALNLD
ATIDAPGLDNALPGLGGTAKGLLKVRGTVDAPQLLADVTARNLRWQALSIAQATIKGDVK
STDQIGGNLDVRVNGIAQPGVNISQVLLTAKGDEKQHKLELKMQGDPVSGQLELAGSFDR
KEQRWKGTLSNTRFQTPVGPVSLSRAIALDYRNQEQKISIGPHCWTNPNAELCVPQTIDA
GAAGHAVVNLNRFDLAMLKPFMPDATQASGVFTGKADVSWDTTKEGLPQGKVSLSGRNVK
VTQTVNDAALPVAFDTLDLTADLHNNRAQLGWTIRLTNNGQLDGQIDVTDPQGRRNLGGN
VNIRNFSLAMINPVFARGEKAAGTLNANLRLGGNVQSPQLFGQLQLTGLDIDGNFMPFDM
QASRVAMNFNGTRSTLDGVIDTKQGQISLSGNADWTQIDNWRAQVAAKGSRVRITVPPMV
RLDVSPDVVFTATPSLFTLDGNVDVPWARIVVHDVPESAVGVSSDEVMLDKDLKPVNPKS
AGIPINSNLTIHVGNNVRLDAFGLKARLTGDLKVAQDSHGLGLNGQINIPEGRFHAYGQD
LIVRKGILLFSGPPDQPMLNIEAIRNPEATEDNVTAGVRVTGMADQPKAEIFSDPAMSQQ
AALSYLLRGQGLDSEQGDGAAMTSALVGLGVAQSGQIVGKIGETFGVSNLALDTAGVGDS
SQVVVSGYIAPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGIDQALDLLYQFEF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatggaagaagattagcctcggcgtcctggtgtttatcatcctgctgctgggg
acggtggcgttcctggtgggcaccacaaccggtctgcatctggtctttaaagcggctgac
cgctgggtgccgggcctgtctatcggccaggtggttggcggctggaaagatttgaccgtt
aaaaacctgcgctaccagcagccgggcgtggcggtcgatgcgggacaattccatctggcg
gtgaatacctcctgcctgtggaacagcagcctgtgcgtgaatgacctttcgcttgccaac
gtgaatgtggctatcgacagcaaaaagatgccaccgtccgcgcctgcggtggaagaggac
agcgggccgctgaacctctcgacgccgtatccgatcacgctcagccgggtcgcgctgaat
aacatcaatatcaaaatcgacgacactacggtgtcggtgatggatttcacttctggcctg
aactggcaggagaaaaacctgaccctcaccccaacgtcattgcggggtctgctgattgcg
ctgccgaaagtggcgaaagtggcgcaggaacaggtgattgagccgaaaatcgacaagccg
aagccggatgaaaaaccgctcggcgaaacaatgaaagatctgttctcgaagcctgttctg
cctgaaatgaccgacgtgcatctgccgctaaacctgaacattcaggaattccgcggcgag
cagctgcgcctgaccggcgacaccgatttaacggtctacacactgctgctgaaagtcagc
agcatcgacggcaacatgaagctcgacgcgctggacgtggattcgagccagggcacggtc
aacgccaccggtacggcgaaattgcaggatgactggccggtagatctgaccctcaacagc
accctgaatatcgacccggtgaagggcgagaaaatcaaaatgaagattggcggcgacgtg
cgcaagcaactcgacgtcgggatcaatctttccggcccggtggacgtgggcattcgcgcc
caggcgcagctggccgaagccgggctgccgctgaatctcgaagtgctcagcaaacagctt
tactggccgtttaccggtgaaaagcagtatcaggccgacaacgtaaaactgaagcttagc
ggcaagatgaccgactatacgctgtcgttcgcgaccgcggtaaaagggcagggtttaccg
cccgccacgattaccctggacgcgaagggcaatgagcagcaggtcaatctcgataagctg
accatcgcggcgctggaagggaaaaccgagctgaaagcgctgctcgactggcagcaggcg
atcagctggcgcggcgagctgaagcttgacggcatcaacaccgccaaagaagtgccagac
tggccggcgaaactgaacggtctgatcaaaaccagcggcagcctgtacggcggcagctgg
caggtcgatgtgccggaactgaaactcaccggtaacgtgaagcagaacaaggtcaacgtc
gacgggaaactgtccggtaacagctacctgcaatggaaaattcccggcctgcacctcgaa
ctggggcgcaacagcgctgacgtgaagggcgaactgggcgtgaaagcgctcaacctcgac
gccaccatcgacgcgccggggctggataacgcactgccgggcctcggcggcacggcgaaa
gggctgctgaaagtgcgcggcaccgtggatgcgccgcagctgttggcggacgtcaccgcc
cgcaacctgcgctggcaggcgctttctatcgcccaggccaccattaaaggcgatgtaaaa
tcgacggaccaaattggcggcaatctcgacgtgcgcgtgaatggcatcgcgcagccgggc
gtgaacatcagccaggtgttgctcaccgccaaaggcgatgaaaagcagcacaagctagag
ctgaaaatgcagggcgatccggtttccggtcagcttgaactggcgggcagtttcgacagg
aaggagcaacgctggaaaggcacgctgagcaatacgcgcttccagacgccggtcggcccg
gtgtcgctctcgcgggcgattgcgctcgattatcgcaatcaggaacagaaaatcagtatc
gggccacactgctggactaacccgaatgccgaactgtgcgtgccgcaaaccattgatgcc
ggtgctgccggacacgcggtggtgaatctcaaccgcttcgacctggcaatgcttaaacca
tttatgccagacgcgacgcaggccagcggtgtgttcacgggtaaggccgacgtcagttgg
gacaccaccaaagaagggctgccgcagggcaaagtgagcctgtccggacgcaatgtgaag
gttacccagacggtgaacgacgcggcgctgccggtggcattcgatacgctcgacctgact
gccgatttgcataacaaccgcgcgcagctgggctggacgattcgtctgaccaacaacggc
cagctcgatggccagatagacgtcaccgacccgcaagggcgacgcaatcttggcggtaac
gttaatatccgcaacttctcgctggcgatgattaaccctgtcttcgcgcgcggtgaaaaa
gccgcgggtaccctgaacgcgaatctgcgtctgggcggcaacgtgcaaagcccgcagctg
ttcggccaattgcagctcactggcctcgatatcgacggcaactttatgccattcgacatg
caggcgagccgggtcgcgatgaacttcaacggcacgcgctcgacgctggacggcgtgatt
gatacgaaacaagggcagattagcctcagcggtaacgccgactggacgcaaatcgacaac
tggcgggcgcaggtggcggcgaaaggtagtcgggtgcgcattaccgtgccaccgatggtg
cgcctcgatgtctcgccggacgtggtctttaccgccacgccaagcctgttcacgcttgac
ggtaacgtagacgtgccgtgggcgcgcatcgtggttcacgacgtgccggaaagcgccgtg
ggcgtgtccagcgacgaagtgatgctcgataaagatctcaaaccggtgaatccgaagtct
gcgggtattcctatcaacagcaacctgacgattcacgtcggcaataacgtgcgtctggat
gcgtttggtctgaaggcgcgtctgactggcgacctgaaagtggcgcaggacagccatggc
ctgggcctcaacgggcaaatcaacattcctgaaggccgtttccacgcctacgggcaggac
ctgatcgtgcgtaaagggatcctgttgttctcaggtccaccggatcagcctatgctgaat
attgaagccattcgtaacccggaagccaccgaagacaacgtgaccgccggggtgcgcgtg
accggaatggcggaccagccgaaggccgaaatcttctctgacccggcgatgtcgcagcag
gccgcgctctcgtatctgttacgcggacaggggctcgacagcgaacagggcgacggtgcc
gcaatgacctccgcactggttggcctgggggttgcacaaagtgggcagattgtgggtaaa
atcggcgagacgtttggcgtcagcaatctggcgctggataccgcaggagtgggtgattcc
tctcaggtggtggtcagcggctatatcgcgccaggtctgcaggtaaaatatggagtggga
atttttgactctctggcaacactcacgttacgctatcgcctgatgcccaagctttatctg
gaagcggtgtctggcatagaccaggcacttgatctgctctatcagtttgagttttag
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