Scandinavium goeteborgense: A8O29_020540
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Entry
A8O29_020540 CDS
T06630
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_020540 (mscM)
Transporters [BR:
sgoe02000
]
Other transporters
Pores ion channels [TC:
1
]
A8O29_020540 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QKN83565
LinkDB
All DBs
Position
4137499..4140816
Genome browser
AA seq
1105 aa
AA seq
DB search
MRLIITFLMAWCLSMGAYAASAPDAKQITQELEQAKAAKPAQPEAVEALQSALNALEERK
GSLERVQQYQQVIDNFPKLSQSLRTQLTSLRDEPRPAPENLTSDALNQEILQVSSQLLEK
SRQAQQEQERAREIADSLSQLPQQQTDARRQLNDVERRVGTATGKTALAQNLSLQAESAK
LKALVDELELAQLSANNRQELARMRSELAQKQSEQLDAYLQALRNQLNSQRQREAEKALE
STELLAENSANLPPSIVQQFTINRELSQALNQQAQRMDLVASQQRQATNQTLQVRQALNT
LREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVHRLRYEDLLSKQTQLRE
SRQTDGEPLANNESRILEAQLRTQRELLNSLLQGGDTLILELTKLKVANGQLEDALKEIN
EATHRYLFWTSDVSPITFAWPLEIVQDLRRLISLDTFSQLGKASIMMLTSKETLIPLFAA
LILVGFSISSRKHFTRFLERSSNRVGKVTQDHFWLTLRTVFWSILVASPLPVLWMTLGFG
LQEAWPYPLAVAIGNGVTATVPLLWVVMICAAFARPNGLFVAHFGWPRNRVARAMRYYLM
SIGLIVPLIMALFMFDNLHDREFSSSLGRLCFVLICGALGIVTLSLKRAGIPLFLDKEGS
GENMVNRMLWSLLIGAPLIAIFAALVGYLATAEALLARLETSVAIWFLLLVIYHVIRRWM
LIQRRRIAFDRAKHRRAEMLAQRARGEEEAHHNTSLEGSPEVDISEVDLDTLSAQSLRLV
RSILMLIALVSVIVLWSEIHSAFGFLENISLWDVTSTAQGVESLEPITLGAVLIAILVFI
ITTQLVRNLPALLELAVLQHLSLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWAKLQW
LVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDW
DRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSDANSEEVTQILMTAAERCSLVID
TPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQMR
LETMDGRKTGRTLTSTGRNRPAGSL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcacttttctgatggcctggtgcctcagcatgggggcgtacgcagca
agcgcccccgacgccaaacaaatcacccaggaactggaacaggcgaaagcggctaagccc
gctcaacctgaagccgtcgaggcgctccagtccgcgctgaacgcgctcgaagaacgtaaa
ggttcgctcgagcgcgttcagcaatatcaacaagtcattgataacttccctaaactttcc
caatcgctgcgcactcagctcactagcctgcgcgacgaaccccgtcctgctcctgaaaac
ctcacttccgacgcgctgaatcaggaaattctgcaggttagcagccagttgctggaaaaa
agccgtcaggcccagcaggaacaggaacgcgcccgggaaatcgccgattcactcagccag
ctgccgcagcagcaaaccgacgcgcgccgtcagctgaatgacgtcgagcgccgggttggc
accgccaccggtaaaaccgcgctggcacaaaatctcagcctgcaggcggaatccgccaag
ctgaaagcactggtcgacgaactggaactggcacagctttcggccaacaaccgccaggaa
ctggcgcggatgcgctcagaactggcacagaaacagagcgagcagctggatgcctatctc
caggcgctgcgtaaccagctcaacagccagcgccagcgggaagccgaaaaagcgctggaa
agcaccgaattattagccgagaacagcgccaacctgccgccgagtatcgtccagcagttc
accattaaccgcgaactgtcgcaggcgctcaatcagcaggcgcagcgtatggatttggtc
gcgtctcaacagcgtcaggcaaccaatcagacgctgcaggtccgtcaggccctgaatact
ttgcgcgagcagtctcagtggctgggttcatcgaacctgttaggcgaagccctgcgcgcc
caggttgcccgtctgccggagatgcctaagccgcagcagctcgataccgaaatggcgcag
ctgcgcgtccatcgcctgcgctacgaagacttgctcagcaagcaaacgcagctgcgggaa
agccgccagaccgacggcgaaccgctggccaacaatgaatcacggattctggaagcccag
ctgcgcacccagcgcgagttgctcaattcgctgctgcagggcggtgatacgctgatcctc
gaactcaccaagctgaaagtcgccaacggccagctggaagatgcgctgaaggagatcaac
gaagccacccaccgctacctgttctggacctccgacgtcagcccgataaccttcgcctgg
ccgctggaaattgtgcaggacctgcgccgtctgatttcgctggataccttcagccagctc
ggtaaagcctcgattatgatgctgaccagcaaagagacgctgatcccgctgtttgccgca
ctgattctggttgggttcagcatcagctcgcgtaagcacttcacgcgcttcctggagcgt
tccagcaaccgcgtcggcaaagtgacgcaggatcacttctggctcacgctgcgcacggtg
ttctggtcaattctggtcgcctcgccgctgccggtgctgtggatgacgctcggcttcgga
ttgcaggaagcgtggccgtacccgctggccgtggcgattggtaacggcgtcaccgccacc
gtgccactgctgtgggtagtgatgatttgcgccgcctttgcccgtccgaatggcctgttc
gtggcgcactttggttggccgcgtaaccgtgtcgcacgtgcgatgcgttattacctgatg
agtatcgggcttatcgtgccgttgatcatggcgctgttcatgttcgataacctgcacgat
cgtgaattctcctcttccctcggcagactgtgttttgtccttatctgcggggcgctgggg
attgtgacgcttagcctcaagcgagcaggcattccgctgttcctcgacaaagagggcagc
ggtgagaacatggttaaccgcatgctgtggagcctgctgataggcgcgccgctgattgcg
atttttgcggcattagtgggttacctggcgacagccgaagcgctgctggcacgccttgaa
acctcggtggccatctggttcctgctgctggtgatttatcacgtgatccgccgctggatg
ctaattcaacgtcgtcgtatcgccttcgaccgcgcgaagcatcgccgggcggaaatgctc
gcgcagcgcgcccgtggtgaagaggaagcgcatcacaacaccagcctcgaaggctcgccg
gaagtggatatcagcgaagtggatctcgacaccctcagcgctcagtcgctgcgactggtg
cgttccatcctgatgcttatcgcgctggtgtcggtgattgtgctgtggtccgaaattcat
tcggcgtttggcttcctcgagaacatctcgctgtgggatgtgacttctacggcgcagggc
gtggaaagcctggagccgattacccttggcgcggtgctgattgcgattctggtgtttatc
atcaccactcagctggtgcgcaatctccctgccctactcgaactggcggtgctccagcac
cttagcctgacgccgggcaccgggtatgccatcaccacaatcaccaaatatttgctgatg
ctgattggcgggctggtcggcttctcgatgatcgggatcgagtgggcgaaattgcaatgg
ctggttgccgccctgggtgtcgggctcggctttggtttgcaggagattttcgccaacttt
atttcgggcctgattatcctgttcgaaaaaccgattcgaatcggcgataccgtcacgatc
cgcgatttaaccggcagcgtaacgaagatcaacacccgtgcgaccaccataagtgactgg
gaccgcaaagagattatcgtgccgaataaggcgtttattaccgagcagttcatcaactgg
tcgctgtcggactccgtcacccgcgtggtgctgaccgtgccggcgccgtcggatgctaac
agcgaagaagtgacgcaaatcctgatgaccgccgcagagcgctgctcgctggtgattgat
accccggctccggaagtgttcctggtcgatttgcagcaagggattcagattttcgagctg
cgtatctacgccgccgaaatgggtcaccgtatgccgctgcgccatgagattcaccagctg
attctggccggtttccgcgaacacggaattgatatgccgttcccaccgttccagatgcgt
ctggaaaccatggacggccggaaaacgggcagaacgctgacgtctacggggcgcaatcgc
ccggcggggagtttgtaa
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