Scandinavium goeteborgense: A8O29_021320
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Entry
A8O29_021320 CDS
T06630
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00730
Thiamine metabolism
sgoe01100
Metabolic pathways
sgoe01240
Biosynthesis of cofactors
Module
sgoe_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A8O29_021320 (thiC)
Enzymes [BR:
sgoe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
A8O29_021320 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QKN83711
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All DBs
Position
4305781..4307676
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AA seq
631 aa
AA seq
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MSTTKLSRREQRAHAQHFIDTLEGTAFPNSKRIYLHGSRDDIRVPMREIQLSPTLLGGAK
DNPQFEQNEAVPVYDTSGPYGDPDIAINVQQGLAKVRQPWIDARHDSEPLDERSSAYTKQ
RLADDGLDELRFTGLLTPKRAVAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRGEV
LRHQHPGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT
KVAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AAAQTIEVGMADMSENFRAKGGEIYLRKEEA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaccaaactctcccgccgcgaacagcgtgcacacgcccaacactttatcgat
acgctcgaaggtacggctttccccaactcgaaacggatttatctccacggttctcgcgat
gatattcgcgtgccgatgcgtgaaatccagctcagcccaacgcttctgggcggcgccaaa
gacaaccctcagttcgaacaaaacgaagccgtgccggtgtatgacacctccggcccgtat
ggcgatccggatattgcgatcaacgtgcagcagggcctggccaaagtacgccaaccgtgg
attgacgcgcgccatgacagcgaaccgctggatgaacgcagctcagcttacaccaagcaa
cgtctggccgatgacggtctcgacgaactgcgcttcaccggcctgctgacgccgaaacgc
gccgtcgcgggcaaatgcgtaacgcagctgcactacgcccgtcagggcatcgtcacccct
gaaatggagttcatcgctatccgcgaaaacatgggccgcgagcgcattcgcggcgaagtg
ttacgccaccagcatccgggtgaaggttttggcgcgcgtctgccggaaaatatcacccct
gaatttgtgcgtgatgaagtcgccgccggacgcgccatcattccagccaacatcaatcac
ccggaatctgaaccgatgatcattggccgcaatttcctggtgaaggttaacgccaatatc
ggcaactcggcggtcacgtcgtccatcgaagaagaagtggaaaaactggtgtggtcaacg
cgctggggcgcagacacggtgatggatttatctaccgggcgctacatccacgaaacccgt
gagtggatcctgcgtaacagcccggtaccgattggcacagtgccgatttatcaggcgctg
gagaaggtgaacggcattgccgaagacctgacatgggaggcgttccgcgacacccttctc
gaacaggcggaacaaggggtggattacttcaccattcacgcgggtgtgctgctgcgctat
gtaccgatgaccgccaaacgcctgaccggcatcgtttcccgcggcggctcgatcatggcg
aaatggtgtctgtcgcaccatcaggaaaacttcctgtatcagcatttccgcgagatttgc
gaaatctgtgccgcgtacgatgtgtctctttcactgggcgacggcctgcgtccgggctcc
attcaggatgccaacgacgaagcacaatttgccgaactgcatacccttggcgaactgacc
aaagtcgcctgggaatacgacgtgcaggtgatgattgaaggcccgggccacgtgccgatg
cagatgatccgccgcaacatgaccgaagaactggaacactgccacgaagcgccgttctac
acgttggggccgttgaccactgatatcgcaccgggctatgaccatttcacctccgggatt
ggcgcggcgatgattggctggttcggctgcgcgatgctgtgctacgtcacgccgaaagag
caccttggcttaccgaataaagacgacgttaaacaagggcttatcacctacaaaattgcc
gcccacgcggctgacctggcgaaggggcatccgggcgcgcaaatccgcgataacgccatg
tcgaaggcgcgctttgaattccgttgggaagatcaattcaacctggcgctcgatccgttc
accgctcgtgcctatcacgacgaaaccctgccgcaggaatccggcaaggtagcgcacttc
tgctcgatgtgcgggccgaagttctgctcaatgaaaatctcccaggaagtgcgtgactac
gcggcggcgcagaccatcgaagtgggcatggcggatatgtcagaaaacttccgcgccaaa
ggtggtgaaatctacctgcgcaaggaggaagcctga
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