Scandinavium goeteborgense: A8O29_021490
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Entry
A8O29_021490 CDS
T06630
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00071
Fatty acid degradation
sgoe00280
Valine, leucine and isoleucine degradation
sgoe00310
Lysine degradation
sgoe00362
Benzoate degradation
sgoe00380
Tryptophan metabolism
sgoe00410
beta-Alanine metabolism
sgoe00640
Propanoate metabolism
sgoe00650
Butanoate metabolism
sgoe00907
Pinene, camphor and geraniol degradation
sgoe00930
Caprolactam degradation
sgoe01100
Metabolic pathways
sgoe01110
Biosynthesis of secondary metabolites
sgoe01120
Microbial metabolism in diverse environments
sgoe01200
Carbon metabolism
sgoe01212
Fatty acid metabolism
Module
sgoe_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A8O29_021490 (fadB)
00650 Butanoate metabolism
A8O29_021490 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A8O29_021490 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A8O29_021490 (fadB)
00310 Lysine degradation
A8O29_021490 (fadB)
00380 Tryptophan metabolism
A8O29_021490 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A8O29_021490 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A8O29_021490 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A8O29_021490 (fadB)
00930 Caprolactam degradation
A8O29_021490 (fadB)
Enzymes [BR:
sgoe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A8O29_021490 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A8O29_021490 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A8O29_021490 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A8O29_021490 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKN83735
LinkDB
All DBs
Position
4341185..4343374
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQPDLKGLLLRSE
KAAFIVGADITEFLSLFQVPPEQLSRWLTFANSVFCRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGAEEALK
LGLVDGIVKPEKLREGAIAILRQAINGDLDWKAKRQPKLDPLKLSKIEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAARLGRDQALVLENQSFVPLAHSNEARALVGIFLNDQFVK
GQAKKLTKNVDTPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLDRGKINGLKLATVISTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEEHVRP
DAVLASNTSTIPISELASVLKRPQNFCGMHFFNPVHRMPLVEVIRGEQTSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFHKVDKVMEKVFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRYGQKNGLGFWRYKEDNKGKP
KKEEDPAVDALLADVSQAKRDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYVDMAQQYQHLGPLYEVPEGLRSKARHNEAYYPPVEPA
RPVGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcattgccgaactg
gtgttcgatgcccccggctcggtcaataagcttgataccgcaaccgtagccagcctcggc
caggcgctggacgtcctcgaaaagcagcctgacctcaaaggcctgctgctgcgttctgaa
aaagccgcttttatcgtcggcgcggacatcaccgaattcctgtcactgttccaggttcca
ccggaacaactcagccggtggctgactttcgccaacagcgtcttttgccgcctggaagat
ttaccggtccctaccctttccgcggtgaacggttacgcgttgggcggtggctgcgaatgt
gtcctggccaccgactatcgtctggcaacacctgacctgcgtatcggtctgccagaaacc
aaactcggcattatgccgggcttcggcggttccgttcgtctgccgcgtttgctcggggcg
gatagcgcgctggaaattattgccgccgggaaagatgtcggcgcggaagaagcgctcaag
ctcggtctggttgacggcatcgtgaagccagaaaagctgcgcgaaggcgcgatcgcgatt
ctgcgtcaggctatcaacggcgacttagactggaaagccaaacgccagccgaagctcgac
ccgctgaaactcagcaaaattgaagccaccatgagcttcaccatcgccaaaggcatggtg
atgcaaacggcgggcaaacactatccggcaccgatcaccgccgtcaaaaccattgaagcc
gcggcacgcttaggccgtgaccaggcgctggtgttggaaaatcaaagctttgtaccgctc
gcccattcgaatgaggcccgtgcgctggtcgggattttcctgaacgatcagtttgtaaaa
ggtcaggcgaagaaactgaccaaaaacgtcgacaccccaaagcaggccgccgtactgggc
gccgggatcatgggtggcggcattgcttaccagtccgcctggaaaggcgtgccggttatc
atgaaggatatcaatgacaaatcgttgaccctcgggatgaacgaggccgccaagctgctg
aataaacagctggatcgcggaaaaatcaatggtctcaaactggcgaccgtgatttctacg
attcacccgacgctcgattacgccggttttgaacgcgtcgatgtcgtggttgaagcggtc
gttgaaaacccgaaagtgaaaaaagcagtgctggcagaaaccgaagagcacgttcgcccc
gatgcggtgctggcgtctaacacctcgacgatccctatcagcgaactggccagtgtcctt
aaacgcccgcagaacttctgcggaatgcacttctttaacccggtgcaccgtatgccactg
gttgaggtgatccgcggcgagcaaacgtccgacgagaccattgcgaaagtggtcgcctgg
gcgagcaaaatgggcaaaacgcctatcgtggtcaacgactgccctggcttcttcgtcaac
cgcgtactgttcccttacttcgccggattcagccagttactgcgtgacggtgccgacttc
cacaaagtcgacaaagtgatggaaaaagtattcggctggccaatgggcccggcctatctt
ctggacgtggtcggcattgataccgcacatcacgctcaggcggtgatggcagctggtttc
ccacagcgtatgcagaaagattatcgcgacgccattgatgccctgtttgatgccagccgc
tacggccagaaaaacggcctcggtttctggcgttataaagaagacaacaaaggtaagccg
aaaaaagaagaagacccggcggttgacgcgttgctggcagacgtcagtcaggcaaaacgt
gacttcagcgatgacgagattatcgcccgcatgatgatcccaatggtcaacgaagtggtg
cgctgccttgaagaaggcattatcgcaagcccggcagaagccgatatggcactggtctac
ggccttggcttccctcctttccacggcggtgctttccgctggctggatacgctcggcagc
gcgaagtacgtcgacatggcgcagcaatatcagcatctcggcccgctgtatgaagtgccg
gaaggtctgcgcagcaaagcacgtcacaacgaagcatattatccaccggttgaacctgcc
cgtccggtgggtgagctgaaaacggcttaa
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