Scandinavium goeteborgense: A8O29_021645
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Entry
A8O29_021645 CDS
T06630
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe03420
Nucleotide excision repair
sgoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A8O29_021645 (uvrD)
03430 Mismatch repair
A8O29_021645 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_021645 (uvrD)
Enzymes [BR:
sgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8O29_021645 (uvrD)
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8O29_021645 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A8O29_021645 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
QKN83764
LinkDB
All DBs
Position
complement(4373570..4375732)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLISVEHSSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRMLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTNNILSAANALIENN
DGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVSRIKAWQDNGGQLEQCAILYRSNAQS
RVLEEALLQVSMPYRIYGGMRFFERLEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQACRELLKDKALAGRAAGALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLFMMYEQEKGEKGQTRIENLEELVTATRQFSYNDEEEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEACVEEVRLRATVSRPVNHQRMG
TPMAENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLENA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgacaaacagcgtgaagccgtggcggcg
tcgcgcaccaatatgctggtgctggctggggcaggaagcggcaagacgcgcgtgctggtg
caccgcatcgcgtggcttatcagcgttgaacacagctcaccgtattcgattatggcggtg
accttcaccaacaaagcggcggcggaaatgcgccaccgtatcggtcagctgatgggcacc
tcccagggcgggatgtgggtcggcaccttccacggtctggcgcatcgcttgctgcgcgcg
caccatctggacgccaatctgccgcaggatttccagatcctcgacagcgaagatcagctg
cgcctgctgaaacgtctgatcaaagccatgaacctcgacgagaagcagtggccaccgcgt
caggcgatgtggtacatcaacggtcagaaagacgaagggctgcgcccgcatcatattcaa
agctacggcaacccggtggagcaaacctggcagaaggtgtatcaggcctatcaggaagct
tgcgaccgcgcgggtctggttgattttgccgagctgctgctgcgtgcccacgagctatgg
ctcaacaagccacatattttgcagcactatcgcgagcgcttcaccaacatcctggtggac
gaattccaggataccaacaacattcagtacgcctggatccgcatgctggcgggcgacacg
ggcaaagtgatgatcgttggcgatgatgaccagtcaatctacggctggcgcggcgcgcag
gtcgaaaacatccagcgtttcctgaaggatttccccggcgccgaaaccatccgtctggag
cagaactaccgctcgaccaacaacattcttagcgcggcgaacgccctgattgagaacaac
gacggccgtctgggtaaaaagctgtggaccgatggcgtcgacggcgaacccatttcacta
tactgcgcgttcaacgagctggatgaagcccgcttcgtcgtgagccgcatcaaagcctgg
caggacaacgggggccagcttgagcagtgcgccattctttaccgcagcaacgcccagtcg
cgcgtgctggaagaagcgttgttgcaagtcagtatgccgtaccgcatttatggcggaatg
cgcttcttcgaacgtctggaaatcaaagatgcgctggcctatctgcgtctgattgccaac
cgcaatgacgatgcggcgtttgagcgcgtggtgaataccccgacgcgtggcatcggcgat
cgcacgctcgacgtggtgcgtcaggcttcccgcgaccggcagctgacgctgtggcaagca
tgccgtgaattgctgaaagataaagcccttgccggacgtgcggccggcgcgttgcagcgc
tttatggagcttatcgacgcactggcgcaggaaactgccgatatgccgctgcatgtgcag
accgaccgggtgattaaagattccggcctgttcatgatgtacgagcaggagaaaggcgag
aagggccagacgcgtatcgagaacttagaggaactggtgacggccacgcgccagttcagc
tacaacgacgaagaagaagatctgatgccgttgcaggcgttcctgtcccacgcggcgctg
gaagcgggcgaagggcaggccgatacctggcaggacgcggttcagctgatgacgctgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtcgggatggaagagggcatgttc
ccgagtcagatgtcgctggatgaaggcgggcgtctggaagaagaacgtcgcctggcctac
gtcggcgttacccgtgcgatgcaaaaactgacgctgacctacgccgaaacccgccgttta
tacggcaaagaggtctatcaccgtccgtcgcgctttgtcggcgaactgccggaggcgtgc
gtggaagaagtgcgtctgcgtgccaccgtcagccgcccggttaaccatcagcggatgggc
acgccgatggcggaaaacgacaccggctacaagctgggccagcgcgtgcgtcacccgaaa
tttggcgaaggtaccatcgtaaacctggaaggcagtggcgaacacagccgtttgcaggtg
gcgttccagggccagggcatcaaatggctggtggcagcttacgcccgtctcgaaaatgcg
taa
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