Scandinavium goeteborgense: A8O29_022020
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Entry
A8O29_022020 CDS
T06630
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A8O29_022020 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_022020 (priA)
Enzymes [BR:
sgoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A8O29_022020 (priA)
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A8O29_022020 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKN83822
LinkDB
All DBs
Position
4453487..4455685
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYVLPDGISAQAGCRVRVPFGKQQERVGIVVSVSDDSELPLKDL
KSVIEVLDDDPVYSPAVWRMLQWAADYYHHPIGDVLFHALPILLRQGKPASAAPLWYWYA
TEQGQAVDIHTLKRSAKQQQALAALRQGKIWRHQVADLEFNDAALQGLRKKGYSDLASEA
PAISDWRHGYAVTGERLRLNTEQATAVGAIHSASDKFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSALNDSERLSAWLKAKNGEAGIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHNEQIPIILGSATPA
LETLHNVRQGKYHQLKLTKRAGNARPATQHVLDLKSQQLQAGLSPALISRMRQHLQADNQ
VILFLNRRGYAPTLLCHECGWIAECPRCDSYYTLHQTHRHLRCHHCDSQRPLPRQCPSCG
STHLVPVGLGTEQLEDVLAPMFANVPISRIDRDTTSRKGALEQYLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHH
PEHPLLQTLLHQGYDAFAQQALAERQTLQLPPWTSHVLIRAEDHNNQEAPLFLQQLRNLL
QASPLADDKLWLLGPVPALAPKRGGRWRWQIVLQHPSRLRLQHIVSGAMALINTLPASRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcacacgttgccctgcccgttccgcttccccgtacctttgactatgtgctg
ccagatggcattagcgctcaggccgggtgtcgcgtccgcgtgccatttggcaaacagcaa
gaacgcgtggggattgtggtctcggtcagcgacgacagcgaactgccgctcaaggatttg
aaaagcgtcattgaagtgctggatgacgaccccgtttactcgcctgccgtctggcgcatg
ctgcagtgggccgcagactattatcaccacccgattggcgatgtgctgtttcacgcgctg
ccgattctgctgcgtcaggggaaacctgccagcgccgcgccgctgtggtactggtatgcg
acggaacagggccaggcggtggatattcacacgcttaagcgctccgccaaacaacagcag
gcgctggccgcgctgcgtcagggcaaaatctggcgccatcaggttgccgatttagaattc
aacgacgccgccctacagggcctgcgtaaaaaaggctatagcgatctggcgagcgaagcg
cctgcgatttccgactggcgccatggctatgcggttaccggcgagcgtctgcgcctgaac
accgagcaggccaccgccgtcggggccattcacagcgcgtcggacaaattttccgcctgg
ctgttggcgggcgttaccggctccggcaaaaccgaagtctatctgagcgtgctggaaaac
gtgctggcacaggggaaacaggcgctggtgatggtgcccgaaatcggcctcacgccgcag
acgattgcccgctttcgtgaacgttttaacgccccggtcgaagtgctgcactccgccctc
aacgacagcgaacgtctgtcggcctggctgaaagcgaaaaatggcgaagccgggattgtg
attggcacccgctcttccttatttacgccgttcaaaaatctcggcgtgatcgtcatcgac
gaagagcacgatagctcctacaagcagcaggaaggctggcgctatcacgctcgtgatctg
gcagtgtggcgcgcccataatgagcaaattccgattatcctcggctccgcgacgcccgct
ctggaaacgttgcacaacgttcgccagggaaaatatcaccagcttaaactgaccaaacgc
gccgggaacgcacgtcccgcgactcagcacgtgctggatttaaaaagccaacagttgcag
gccgggctttctccagcgttaatcagccggatgcgtcagcatttacaggccgataatcag
gtcattttattcctcaaccgtcgcggttatgcgccgacgctgctgtgtcatgaatgcggc
tggatagcggaatgcccgcgctgcgacagctattacacgctgcatcagacccatcgccac
ctgcgctgccaccattgcgatagccagcgcccccttccgcgtcaatgcccttcgtgcgga
tcgacgcatctggtgccggtggggttagggactgaacagcttgaggacgtgctggcgccg
atgtttgccaacgtcccgatttcgcgtatcgaccgcgacaccaccagccgcaaaggcgcg
ctggaacaatacctggcggaggtgcatcgcggcggggcgcgcattctgatcggcacccag
atgctggccaaaggtcaccacttcccggatgtcaccctcgtggcgctgcttgatgtcgat
ggcgcgctgttctcggctgatttccgttccgccgagcgtttcgctcagttgtacactcag
gtttctggccgtgcgggccgggccgggaaacagggcgaagtgattctgcaaactcatcac
ccggaacatccgctgctgcaaaccctgctacatcagggctatgacgcgtttgctcagcag
gcgctggcggagcgtcaaacgctccagttgccgccgtggaccagccatgtgctgatccgc
gcggaagatcacaataatcaggaagcaccgctgtttctgcagcagctgcgcaatttactt
caggccagcccgctggcggatgacaaactgtggctactcggcccggtgcctgctctcgcg
ccaaaacgcggcggccgctggcgctggcagattgtgctgcaacacccatcacgcctgcgt
ttacagcatatcgtcagtggggcgatggcgctgatcaacacccttcctgcctcacgtaaa
gtgaaatgggtgctggacgttgacccgatcgaaggctaa
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