KEGG   Scandinavium goeteborgense: A8O29_022300
Entry
A8O29_022300      CDS       T06630                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sgoe  Scandinavium goeteborgense
Pathway
sgoe03030  DNA replication
sgoe03410  Base excision repair
sgoe03420  Nucleotide excision repair
sgoe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sgoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A8O29_022300 (polA)
   03410 Base excision repair
    A8O29_022300 (polA)
   03420 Nucleotide excision repair
    A8O29_022300 (polA)
   03440 Homologous recombination
    A8O29_022300 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgoe03032]
    A8O29_022300 (polA)
   03400 DNA repair and recombination proteins [BR:sgoe03400]
    A8O29_022300 (polA)
Enzymes [BR:sgoe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A8O29_022300 (polA)
DNA replication proteins [BR:sgoe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A8O29_022300 (polA)
DNA repair and recombination proteins [BR:sgoe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A8O29_022300 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A8O29_022300 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E HHH_5
Other DBs
NCBI-ProteinID: QKN83876
LinkDB
Position
complement(4512927..4515719)
AA seq 930 aa
MVQIQENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPEITLINTMTNTVLGPEEVLTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAAKLELNK
EMAYLSYKLATIKTDVELELTCDQLVVQEPVADELLSMFKQYEFKRWITDVEAGKWMQAK
GGKPSAKPLAAPAAAVEEEPEEPATALSSENYVTILDEATLTQWIEKLKKAPVFAFDTET
DSLDNISANMVGLSFAAEPGEAAYVPVAHDYIDAPEQLSLERVLELMKPLLEDDNSLKVG
QNLKYDRGILANYGIELRGIAFDTMLESYTLDSVAGRHDMDSLSDRWLKHKTITFEEIAG
KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKQEGPLNVFQHIEMPLVPVLS
RVERNGVNIDPDVLHNHSAELSTRLIELEQKAHEIAGEAFNLSSPKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINAKTGRVHTS
YHQAVAATGRLSSTEPNLQNIPVRNEEGRRIRQAFVAPEDYLIVSADYSQIELRIMAHLS
RDKGLLTAFAEGKDIHRATAAEVFGLPLDSVSNEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVREYMERTREQAKEQGYVETLEGRRLYLPDIKSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLLKEQPRVRMIMQVHDELVFEVHKDDLDAVTK
KVHELMENSTTLDVPLLVEVGSGVNWDQAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggttcagatccaagaaaaccctctcatcctggttgatggctcctcttatctctaccgc
gcataccacgcgtttcctccgctgaccaacagcgcaggtgaaccgacgggcgccatgtac
ggcgtactgaatatgctgcgcagcctgatcatgcagtatcaaccaacgcatgcggcggtt
gtctttgatgccaagggcaaaacattccgtgacgaactgttcgaacattacaaatctcat
cgcccgccgatgcctgacgatcttcgtgcgcagattgaaccgctgcacgcgatggtcaag
gcgatgggcctgccgttattggcagtctcaggcgttgaggctgatgacgtgattggcacc
ctggcgcgtgaagccgaaaaagcgggccgtccggtgctgatcagtaccggtgataaagac
atggcccagctggtcacgcctgaaatcacgctcatcaacacgatgaccaataccgtgctt
ggcccggaagaagtgcttaccaaatacggtgtgccgccggaactgattatcgatttcctc
gctctgatgggtgactcctcggataacattcctggcgttccaggcgtgggcgagaaaacg
gcacaggcgctgctgcaaggtttgggcggtctggatacgctgtacgccgagccggagaaa
atcgccgggctcaccttccgtggcgcgaaaaccatggccgcgaagcttgagctgaacaaa
gagatggcttatctctcttacaagcttgcgaccatcaaaaccgacgttgagctggaatta
acctgcgatcagcttgtggttcaggagccagtggccgatgaactgcttagcatgtttaag
cagtatgagttcaagcgttggattacggatgttgaagccgggaaatggatgcaggccaaa
ggtggcaaaccatcggcaaaaccgctggctgcgcccgccgctgcggtggaagaagaacct
gaagagccagcaactgcgctctcttcggaaaactacgtcactattctcgatgaagccacg
ctcactcagtggatcgagaagctgaagaaagcgccggtctttgcgtttgatactgaaacc
gacagcctcgacaacatctctgccaatatggtcggtctgtcgtttgccgcagagccgggc
gaagccgcctacgttccggtcgcgcatgattatatcgacgcgccggagcaactctcactc
gagcgcgtgctggagttgatgaaaccgctgctggaagatgataactctctgaaagtcggc
cagaacctgaaatacgatcgcggtatcctggcgaattacggcattgaactgcgcggtatt
gcgttcgataccatgctggaatcctacacgctcgacagcgtggccgggcgtcatgacatg
gacagcctctctgaccgttggttaaaacataaaactatcactttcgaagaaatcgccggt
aagggaaaaaatcagctcacctttaatcagattgccctcgaagaagcgggtcgttatgcg
gcagaagacgccgacgtcacgctgcagctgcatctgaaaatgtggccaaaactgcaaaag
caggaaggtccgctgaatgttttccagcatatcgaaatgccgttagtgcctgttctttca
cgcgtggagcgcaatggagtcaatatcgacccggacgtgctgcataaccattcggcggag
ctttccacgcgtctgattgagcttgagcaaaaagcccacgagatagcgggtgaggcgttt
aatctgtcctcaccaaaacagctgcaaaccattctgtttgaaaagcagggtattaagccg
ctgaagaaaaccccaggtggcgcgccgtcaacttctgaagaagtactggaagagctggcg
ctggattatccgctgccgaaagttatccttgaatatcgcgggttggcgaagctgaaatcg
acctacaccgacaaactgccgctgatgatcaatgctaaaacgggccgcgtgcacacttcc
taccatcaggcggttgcggcgacggggcgtttgtcttcgaccgagccgaacctgcaaaac
attccggtgcgtaatgaagaagggcgccgtattcgtcaggcgtttgtcgcaccagaggac
tatctaattgtttctgcggactactcgcaaattgagctgcgcatcatggcgcacctttcc
cgcgataaaggcctgctgacggcctttgccgaaggcaaagacattcaccgagctaccgcg
gcggaagtttttggtctgccattagatagcgtcagtaacgaacagcgtcgcagcgcgaag
gcgatcaacttcggcctgatttatggcatgagcgcgttcgggctatcccgtcagctgaat
attccgcgtaaagagtcccagaaatacatggatctctactttgagcgttatccgggcgtg
cgtgaatatatggaacgtacgcgtgagcaggctaaagagcagggttacgttgaaacgctg
gaagggcgccgtctgtatctgccggacatcaaatccagcaatgcagcacgtcgtgcaggt
gctgaacgtgcggcgattaacgccccgatgcagggcacggcggcagatatcatcaaacgt
gcgatgattgcggtcgacgcctggttgctgaaagagcagccgcgcgtacgaatgatcatg
caggtgcacgatgaactggtgttcgaagtgcataaagacgatctcgatgcggttacgaag
aaagtccatgagctgatggaaaatagcacgacgctcgatgttccattgctggtggaagtg
ggcagcggtgttaactgggatcaggcgcattaa

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