Sphaerochaeta pleomorpha: SpiGrapes_0408
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Entry
SpiGrapes_0408 CDS
T01673
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sgp
Sphaerochaeta pleomorpha
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgp03021
]
SpiGrapes_0408
03009 Ribosome biogenesis [BR:
sgp03009
]
SpiGrapes_0408
Transcription machinery [BR:
sgp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SpiGrapes_0408
Ribosome biogenesis [BR:
sgp03009
]
Prokaryotic type
rRNA transcription factors
SpiGrapes_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
Zn_ribbon_3
Zn_Ribbon_1
S1
DZR
UPF0547
SAM_EPH
Zn_ribbon_DZR_6
KH_NusA_C
MRP-S35
Prok-RING_1
Zn_ribbon_15
Zn_Ribbon_TF
DZR_2
DUF7575
KH_2
Zn_ribbon_8
zf_C2H2_13
RAD51D_N
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AEV28266
UniProt:
G8QW23
LinkDB
All DBs
Position
446201..447694
Genome browser
AA seq
497 aa
AA seq
DB search
MATDIGDAIRNMIAEKGISEELVINTIEDILRAAYKRKFGTEENAVIEFSEDYTSVELSA
RRKIVDDDNWYNEVTEISLSDAQKINEDCEIGDELLIPVDLKEFDRISVQSAKQRAHQSF
RDIQKDTLYSEFKAKEGQLIIGYFRRQIANGDIYVDIGSTEGILPRRNQSNRESYGNNDK
IKCYVDKVEKAERGVRVVLSRTSPELIRQLFEVEVPEIAQNQIDIIKIVREAGYRTKVAV
ASRNDDIDPVGACVGLKGNRIQTIMSEIEGEKIDILRYDPNPVNYIRNALSPAQVGDVVI
IDKNIYHAVAIVEESQLSLAIGKQGLNVRLANKLCDWLIDVKTPAQFQEMDIATDARSRA
ESIFRENDIFEETEEEQVQGETAGVIEPAPVESGVSEDEIALSDLPLDKMLLKKLQFHDV
YSVEEFINLSEEDLTSFGDLSDEEINEVKDTINEYVDIVEDEDDGETEYVCPNCGEPITT
DMTVCPSCGTGLAFEVE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatataggtgatgctattcggaatatgattgcagaaaagggtatctcagaa
gaattggttattaataccattgaagatattctccgcgctgcatacaaaagaaaattcggg
actgaagaaaatgccgtgattgaattcagcgaggactatacttctgttgaactcagtgca
cgccgaaagattgtcgatgacgataactggtataatgaagttaccgagatttctcttagc
gatgcgcagaaaatcaatgaagattgtgaaattggcgatgaattgctaattccagttgat
ttgaaagaatttgatagaatcagcgtccagagtgcaaagcaacgtgcccatcagagtttc
agggacatccagaaagatacgctctatagcgaattcaaggccaaggaaggccagctgatc
atagggtattttagacgtcagattgccaatggagatatctatgtggacattgggtctacc
gagggtatcctgccaaggcgcaaccagtctaaccgggaaagctatggcaataatgacaag
atcaaatgttatgtcgataaagtagagaaggctgaacgtggtgttcgggttgtcctttcc
aggactagccctgaattgatccgccaattgttcgaggtcgaggttcccgagattgcccag
aaccagattgatattatcaagattgttcgcgaggcaggatacaggactaaagtggccgtt
gcttcacgcaatgacgatatcgatcctgtcggcgcttgtgtcgggttgaagggaaaccgc
attcagactataatgagtgaaattgaaggggaaaaaatcgatatccttcgttacgatccc
aacccggtcaactatattcgcaatgcattgtctcctgcacaggttggtgatgtagtcatt
atcgataaaaacatttatcatgcagttgcaattgttgaggaaagccaactttcacttgca
attggtaaacagggattgaatgttcgtttggcaaacaagctttgtgactggctcatagat
gtgaagacacctgcccagttccaagagatggatatagcaactgatgctcgctccagggcg
gagagcatattcagggaaaacgatattttcgaagagaccgaggaagaacaggttcagggc
gaaacagcaggagttattgaacctgcaccagtggaaagcggggtgagtgaagatgaaatt
gcgctctccgaccttccccttgacaagatgcttctcaagaagctgcaattccacgacgtt
tacagcgttgaagaattcatcaaccttagcgaagaagatctcacttctttcggcgattta
agcgatgaggaaatcaacgaggtaaaggataccatcaacgagtatgtcgatatcgttgaa
gacgaagatgatggagagaccgagtatgtttgcccgaactgcggggagcccatcaccact
gacatgactgtatgcccgagctgtggcaccggtcttgcatttgaggtagagtaa
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