Sphaerochaeta pleomorpha: SpiGrapes_0693
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Entry
SpiGrapes_0693 CDS
T01673
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp03420
Nucleotide excision repair
sgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SpiGrapes_0693
03430 Mismatch repair
SpiGrapes_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_0693
Enzymes [BR:
sgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SpiGrapes_0693
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SpiGrapes_0693
MMR (mismatch excision repair)
Other MMR factors
SpiGrapes_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
YgfZ_barrel
ResIII
DEAD
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
AEV28534
UniProt:
G8QY29
LinkDB
All DBs
Position
756457..758472
Genome browser
AA seq
671 aa
AA seq
DB search
MHFNLEKELNKEQCKAASTLSGPLLVIAGAGSGKTRMLTFRIAHMLESGIDESNILALTF
TNKAAKEMGERIKSLTGLPLKKMTTTTFHSFGMGILKQYIQHLGFKNNFTVYDSNDRMAL
LKEVIINLDYVPDTFDLYELSNLFSDLKTKRSVFAAGASDKIRNLYSEYEKHLKAYNAVD
FDDLIMKPLDLFEKKPEVLAALRNRYTHILVDEFQDTSLSQYRIVELLAQESRNLCVVGD
DDQSIYSWRGANYENLVMFERDFPERLEIKLERNYRSTGTILEAANKLIVHNQQRKEKKL
WTDSGKGSSISLIHPANEDDESAVIAEQILMAHRKENRPFSDFGVLVRTNSLVPTLETRF
MEKEIPTQVSGGQSFFDRKEIRDIVSYLKVLANQDDDINLLRVINTPRRGIGRVTLEKMR
KVADDHKCSLYSALSLMAIATDGQIKEGMQKTIKRFVTMIDDYQQQLFEAKSNKNMILRS
LIHEIGYKDFLAEEHPDNENIVNFKMKGIGILCDMFARWERNPDNYNSSIFDYINRISIA
GKEDSEGDRKGKVALMTMHASKGLEFDTVFLAGIEDQYVPHARAIEDNPANIDEERRLFY
VAITRARRVLVISSCERRKRGHDEILSVPSRFLEEIPKELFDEEDPSRELSANEVTDKLR
LFREKLEARKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaatctagaaaaggaactcaataaagagcagtgcaaagctgcttcgaccctc
tctgggccgcttttagtcatcgcgggggcaggcagtggaaaaacacgcatgctcacgttt
cgtattgcccatatgctggaaagcggaatagacgaaagcaatatccttgccttgaccttt
acaaacaaggctgccaaggaaatgggggaaagaatcaaatccttgactggccttcccctt
aaaaaaatgactaccactacgttccattcctttggcatgggcattctcaaacaatatatt
caacaccttgggttcaagaacaattttaccgtctatgatagcaacgaccggatggctttg
ctcaaggaagtcattatcaacctggattatgtccccgataccttcgatctctatgagctt
tccaacctattttccgatttgaagacaaaacgatctgtttttgctgccggggcctctgat
aagatcaggaacctctacagcgagtatgagaaacacctgaaagcctacaatgccgttgac
ttcgacgacctgatcatgaagcctttggatcttttcgaaaaaaagcctgaggtccttgcg
gccctgagaaacaggtatacccatatcctggtggatgaatttcaggatacttccctttcc
caataccgtattgtagagcttttagcccaggaaagccgaaatctctgtgtggtcggcgac
gatgaccagagcatctatagctggagaggggcaaactacgagaaccttgtgatgttcgag
cgtgacttccccgaaaggctggaaatcaaactggagcggaactaccgctccaccgggact
atccttgaggctgccaacaagctcatcgtacacaatcaacaacgaaaagagaagaaactc
tggactgacagcggtaagggaagttccatcagtctcatccaccccgcaaacgaggacgat
gagtccgcggtcattgccgaacagattctgatggcccatcgtaaggagaaccgcccgttc
tctgatttcggggtacttgtccgtaccaattcccttgtccctacgcttgagacacgtttt
atggaaaaggaaatccccacccaggtatcgggtggacaaagttttttcgaccgaaaggaa
atccgtgatattgtcagctatcttaaagtcctggcaaaccaagatgatgacatcaatcta
ctcagggtcatcaacaccccaagaagaggcataggccgggtaacgctcgaaaagatgcgc
aaggtagccgacgaccacaagtgttcgctttactctgccctctctttgatggcaatagct
acagatggccagatcaaggaagggatgcagaagacaattaagcggtttgtcaccatgatc
gatgattaccagcagcagctttttgaggcgaaatcaaataagaatatgattctcagaagt
ctgatccacgaaatcggttacaaggatttcctcgctgaggaacacccggacaatgagaat
atcgtcaatttcaaaatgaagggaatcggaatcctctgtgatatgtttgcacggtgggaa
cgcaatcctgacaactataattcttcaatattcgattacataaacaggataagcatcgca
ggtaaggaagacagcgaaggtgacaggaagggaaaggttgccctgatgactatgcatgct
tccaaggggttggaattcgatacggtattccttgccggtatcgaagaccaatatgttccc
catgccagggcgattgaagacaatccggcaaacatcgatgaggagcgaagactcttctat
gtggccatcacccgcgccaggagggtgctggtaatatcatcgtgtgaacgcaggaagcgt
ggccatgatgagattttgagtgtcccctcgcgcttccttgaggaaataccgaaggaactt
ttcgatgaggaagatccaagcagggagctctctgcaaatgaggtaacggacaaactccgg
ttgttcagggagaaactggaggcaaggaaaaaatga
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