Sphaerochaeta pleomorpha: SpiGrapes_0999
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Entry
SpiGrapes_0999 CDS
T01673
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sgp
Sphaerochaeta pleomorpha
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_0999
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SpiGrapes_0999
Archaeal homologous recombinant proteins
SpiGrapes_0999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
UvrA_DNA-bind
nSTAND3
ABC_tran
AAA_16
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEV28824
UniProt:
G8QRP1
LinkDB
All DBs
Position
complement(1095877..1099020)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKPLHLSMSAFGPYADKVEVDFTPFGGKGIFLITGDTGSGKTTIFDAIAFSLYGEASGSI
RTADTLRSDFATANTKTVVTLTFLHRNLLYVLERNPRYERPKKTGEGLTTETADATLKLP
SGDIVTGYQSVTAKIVDILGITYGQFKQISMIAQGEFLQLLLADSKDRGAIFRRVFNTEL
YQTVQKLLKVKESEAKRQCEDTDLRILQYIAGISCPEDDTSILSAEKCRTSSIHDAPAIL
MELHALVQSDKEALQTVRTLSGELKQHHSQLVSSMIQAEYTNQKFKDLKKAETTKQDLLD
SVEDYHKNEVCLRSAEIALYSLKPLQDAYQTSVANVKELLFAIEKTEKALVIQNQELETL
LEDYTKETKKEENREALSSLIERLSLTLPLYAQMEEKQKKLDALVSSQTQGNLDLQVLKT
NQQGLQTEKETTQEALQKRENVEVALASCLQEHKNLTSTRCNLLEMQSSLETVEKRIGEY
AKIRESYLALEGAFKESNTTYLEAEALFFREQAGILAAQLEEGRPCPVCGSTIHPDKAKV
LFEAPREAELQAMKQASDKARQSLQDASESMSSKRTEIRESWALVTKMATVVGIEEETEP
DLSVLFSKVEAKLQTIGLQLSENEKAIAELRKQEEQKKQLKTLLAELEISLANKANELRK
QEQALVVLGSSVAMVQGELATMRQSLEYNTTDEVNKVIAKQQSVLDAMKKRFKESSEAYQ
KCKELQHGNQMLLSDQKERLELARKEETKASEAFSRQVEASGFEDSYAYQAALKSEQEIR
ELKTSIAQFSDALKANQQDIERLERETKDLRIEDLQALIQKKEGGEEQQHQLDAHLQTLS
SRLGINEKVSSFLAKELADVQASRDTYLLVSNLSKTASGELSGKQKIAFEHYVQAAYFNQ
ILSEANKRLNRMANGRFALLRKEESSDLRSQAGLEIVVLDHYTGRVRPAKSLSGGESFKA
SLSLALGLSDVIQSYAGGVEIDTLFIDEGFGALDTESLEQAIQTLVSLSQGNRLVGIISH
VSELKERLDRQIVVNKSHLGSSVLVKA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattgcatctgagtatgagcgctttcggcccctatgctgacaaagttgaggtc
gatttcacgcctttcgggggaaaagggatttttctgatcaccggcgatacaggctctggg
aagaccacgattttcgatgccattgccttctcgctgtatggggaggcaagcggatcaatt
cgtactgccgacacgctccgcagtgattttgccactgcaaatactaaaacagtagtaacc
ttaacattcttacatagaaatcttctctatgtactggaaagaaatcctcgctatgagcgt
ccaaagaaaacaggggagggccttacaaccgagactgccgacgcaacattgaaactccct
agtggcgacatagtcacaggctaccagagcgtgactgcaaaaatcgtggacatccttggc
attacctatgggcaattcaagcagatttccatgattgcccagggtgaattcctccagttg
ctacttgcagacagcaaagacaggggagcgatattcaggcgggttttcaatacagaactc
tatcagactgtgcaaaaactcttgaaagtgaaggaaagtgaagctaaaagacaatgcgaa
gataccgacttgcgtatcttgcaatacatagccggtatttcctgtcctgaagatgatacc
tctatcctatcggctgagaaatgccgtacttcttccatccatgatgctcctgccatttta
atggagttgcatgcgctcgtgcaaagtgacaaggaagccttacagacagtaaggacgcta
tcaggtgagctcaagcaacaccattcccagctagtttcatctatgatacaggcagaatat
accaaccagaagttcaaagacctaaaaaaggctgagacaaccaaacaggacttgctcgat
tctgtcgaggattaccacaaaaatgaagtatgccttcgttctgccgagattgccctgtat
tccctcaagcccttacaggatgcctaccaaacgtcagttgccaacgtgaaggagcttctt
tttgcaatcgaaaagacagaaaaagctttggttatccagaaccaggagctagaaaccctc
cttgaggattatacaaaagaaacgaaaaaagaggaaaacagagaggctctctcctctttg
atcgaacgactttccctgacgcttccgctctatgcgcagatggaggaaaaacagaagaaa
ttggatgcattggtttctagtcaaacgcagggaaaccttgacctgcaagtgctaaaaacc
aaccagcaagggttgcaaacagagaaagaaaccactcaggaagcattgcagaaacgagaa
aatgtagaagttgccctggcatcctgccttcaggaacataaaaacctcacgagtacaaga
tgcaatctgcttgaaatgcaatcttctttggagacagtggaaaagcgaataggggaatat
gcaaagattcgagaaagctacctggcattggaaggggccttcaaagaaagcaatacaacg
tatcttgaggctgaggctctctttttccgggaacaggcgggaatcctggctgctcagctg
gaagaggggaggccttgccctgtctgtggttctaccatccatccggacaaagcaaaggtg
ttatttgaagctccccgtgaggcagagctacaggctatgaaacaggcaagtgacaaggcg
aggcagagtttgcaggacgcaagtgaatcgatgtcttcaaaacgcacggaaatcagggaa
tcatgggctctggtaaccaaaatggccacggtagtgggtatcgaagaagagacagagcct
gatctctccgtgcttttttcaaaagtggaagcgaaattgcagacaataggtctgcaacta
agtgaaaacgaaaaggctattgcagaattacgaaaacaggaagaacagaaaaaacaattg
aaaacattgcttgccgaactggagatatcgttggcaaacaaagcgaatgaactgagaaaa
caggagcaagcccttgttgttctcggttcttctgtagctatggtgcagggcgaattggcg
acaatgcgacaatcactggaatacaatactacagacgaagtaaacaaggtgattgcaaaa
cagcaatcggtattggatgcaatgaaaaagcgattcaaagaaagttcagaagcctaccaa
aaatgtaaggaactacagcatggcaaccagatgcttctttctgaccagaaagagcggttg
gaactagcacgaaaggaagaaacgaaggcaagcgaggctttttccaggcaagtggaggcc
tcaggtttcgaagattcttacgcctatcaagcagctttgaaaagtgagcaggagattaga
gagctgaaaacatccattgcacaattcagcgatgccttgaaggctaaccaacaggatatt
gaacggctggagagggaaaccaaagacctaaggatagaggacctgcaagcactgatacaa
aagaaggagggtggagaggaacaacagcaccaactcgatgcacatctgcagacgctgtct
tcccgtctagggataaacgagaaggtatcctcttttctggccaaagagcttgcagacgtt
caggcaagccgcgatacctatctgctggtcagtaacctctccaagacggcaagcggtgag
ttgtcaggtaaacagaaaattgcgttcgaacactatgtgcaggccgcctatttcaatcaa
atactgtcagaggccaataagcggctcaatcgtatggcaaacggccgatttgccttgttg
agaaaagaggaatcgtctgatctccgatcccaggctgggttggaaatagtggttcttgac
cactataccggacgggttcgcccggctaagtccttgtcagggggagagtctttcaaggcc
tctctctcacttgccctcggattgtcggatgtaatccaaagctatgccgggggagtggag
atagatacactcttcattgatgaggggttcggagccttggacacggaatcgttggagcag
gccatacagactttggtctctctttcccagggaaatcgtctggtgggtatcatttcccat
gtgagcgaactcaaggaacggttggacaggcagatcgtagtcaataaaagccatctggga
agttctgtcctggtgaaggcctaa
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