Sphaerochaeta pleomorpha: SpiGrapes_1000
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Entry
SpiGrapes_1000 CDS
T01673
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sgp
Sphaerochaeta pleomorpha
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_1000
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SpiGrapes_1000
Archaeal homologous recombinant proteins
SpiGrapes_1000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEV28825
UniProt:
G8QRP2
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All DBs
Position
complement(1099017..1100168)
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AA seq
383 aa
AA seq
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MKLLHIADLHIGKRVNEFSMIEDQRHILSQILTIVRDEKAEAVLIAGDVYDKSQPSIEAV
ELLDEFLTSLTEMGPAIYIISGNHDSPERLGFGSRILGKNRLFIAGAFTGSLQETLLEDA
YGNVHVFLLPFIKPAVVSHYLDQSVETYDEAARMVLDTAKIDTSERNILLAHQFVTNGLE
MPEHSDSENLSVGGLDNVDASAFILFDYVALGHLHRPQTLANGLLRYAGSPLKYSFSEAR
GKKSVTIVELKEKGTREIRTVDLFPLHDVREIKGPLAHLLQMGTEDVSGNQDYIHAILTD
EEELYDAIGQMRRIYPNLMALDFDNSKTSQTNGTTAICSDDIERKQPIELFSDFYLQQNN
EELSAEGLAVLKDVFAQAGGKEL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctacatatagctgacttgcatattggaaagcgcgtcaatgaattcagtatg
atcgaagaccagcgtcacattctctcccagatcctcactatcgtcagagacgaaaaagcc
gaggctgttctcattgccggggacgtatatgacaaaagccagccttcgattgaggctgtg
gagcttcttgacgagtttcttacgagcttgactgagatgggccccgcaatctatatcata
agcgggaaccacgattctcccgagcgattgggattcggaagccggatccttgggaaaaac
cgtcttttcattgctggggcctttaccggttccctgcaggagacgttgctggaagatgcc
tatgggaacgtccatgtgtttctcctgccgtttatcaaaccagcagtggtgtcccactat
ctggaccaatcggtagaaacctacgacgaggcagccagaatggtcctcgatactgcaaag
atcgatacgtcagagcgtaatatcctccttgcccaccagtttgtgaccaatgggttggaa
atgcccgagcattcggactcagaaaacctttctgtcggggggttggataatgtagacgcc
tcagctttcatcctttttgattatgtagcccttggtcatctccatagaccacaaaccttg
gccaacggtttgttgcgttatgccgggtctcccctcaagtattccttttctgaggcaagg
gggaagaaatcggttaccattgtggaactcaaggaaaagggaacgagggaaatcaggacc
gtggacctttttcccctgcatgacgtgagggagatcaaagggccccttgcccatttactg
caaatggggaccgaggatgtttccggcaaccaggattatatccatgcaatcttgactgat
gaggaagaactctacgatgccatagggcaaatgcgcagaatctatcccaacctcatggca
ttggactttgataacagcaagacaagccaaaccaatggaactactgccatttgctcggat
gatatcgaacgaaaacagcctatcgagctgttctctgatttttacctgcaacaaaacaat
gaagaactctcagccgaaggtcttgcagttctaaaagacgtgtttgcccaggcaggaggg
aaagagctatga
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