Sphaerochaeta pleomorpha: SpiGrapes_1771
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Entry
SpiGrapes_1771 CDS
T01673
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sgp
Sphaerochaeta pleomorpha
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgp03009
]
SpiGrapes_1771
Enzymes [BR:
sgp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SpiGrapes_1771
Ribosome biogenesis [BR:
sgp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SpiGrapes_1771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
Methyltransf_25
Methyltransf_4
MTS
PrmA
Methyltransf_15
Methyltransf_11
TRM5-TYW2_MTfase
UPF0020
PCMT
Methyltransf_24
Ubie_methyltran
N6_N4_Mtase
FtsJ
Methyltransf_23
Methyltransf_12
Methyltransf_32
CMAS
FliG_M
Motif
Other DBs
NCBI-ProteinID:
AEV29567
UniProt:
G8QXK4
LinkDB
All DBs
Position
complement(1931414..1932571)
Genome browser
AA seq
385 aa
AA seq
DB search
MKNYKQCPLARECGGCQLMEYPYPEQLEYKMEYVEEMLDKFGTVAPIIGMEDPTRYRTKV
QAVFGRDLRGKVISGIYREGTHHIVAIRDCLVEDPTADAILGTIRSLMTRFGIEPYDEDE
QMGYIRHVLIKTSRYSGHVMVVLVCGQWPIPSKDDFLSALKQQHPEIATISLNMNYDQTS
MVLSEIPEKILFGKGFIEEKLCGLMFRISAKSFFQVNPVQTEVLFNIAMKMAQLKDTDEV
IDAYCGTGTIALIAASKGVKHVLGIEVSPDAIEDAMVNARNNNLSNVDFVCDDASAYLKQ
MAKDKKSCDVLFLDPPRAGSDERFLAAALKMAPRKIIYISCNAITLERDLRYMLKFSPYE
VRGIQPVDMFPHTTHVETIVLLERV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattacaaacaatgtccccttgcgcgggagtgtggcggttgccagttgatggag
tatccctatcccgaacagttggaatataagatggaatacgttgaagagatgcttgataag
tttggaacggttgctcctatcatcggaatggaagatcctacccggtatcgcaccaaagtc
caggcagttttcggcagggatctccgtggtaaagtaatcagcggaatctaccgcgaagga
acccaccatatcgttgccatccgtgactgtctggtcgaagaccctaccgccgatgctatt
cttggtacgattcgttccctcatgacacggttcggtatcgaaccgtatgatgaagacgaa
cagatgggttatatccgtcatgtccttatcaaaacctcccgctatagcggccatgtcatg
gttgttttggtctgcgggcagtggcccattccctcaaaggatgatttcctcagtgccttg
aagcagcagcatcccgagattgccaccatctcgttgaacatgaactatgaccagacgagt
atggtgctcagtgaaattcctgagaaaatcctcttcggcaaaggcttcatcgaggaaaaa
ctctgtggtctgatgttccgtatctctgcaaagtctttctttcaggtcaaccctgtacaa
acagaagtgctgttcaacatcgcaatgaaaatggcccagttgaaggatactgatgaagta
attgatgcctattgcggaaccgggaccatcgctcttattgccgcaagcaaaggggtcaag
catgtgctcggtattgaggtaagccccgatgctattgaagatgccatggtgaatgcaagg
aacaacaacctgtcgaacgttgattttgtctgtgacgatgcctctgcctatcttaagcaa
atggccaaagacaagaaaagctgcgatgttctgttccttgatccgcctcgggccggaagc
gacgaacgattccttgccgccgcgctcaaaatggctccaaggaaaatcatatatatctcc
tgcaatgccatcacccttgaacgtgacctacgctatatgctcaagttcagcccctatgaa
gtgaggggaatacaacctgtggacatgttcccccatactacccatgtggagaccattgta
cttttggaacgggtttaa
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