Sphaerochaeta pleomorpha: SpiGrapes_2006
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Entry
SpiGrapes_2006 CDS
T01673
Name
(GenBank) transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
sgp
Sphaerochaeta pleomorpha
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgp03000
]
SpiGrapes_2006
Transcription factors [BR:
sgp03000
]
Prokaryotic type
Helix-turn-helix
Other families
SpiGrapes_2006
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
Diguanyl_cycl_sensor
AAA_2
MCM
HTH_8
HTH_31
HTH_3
AAA_7
PAS_8
Xre-like-HTH
HTH_11
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AEV29793
UniProt:
G8QQE8
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Position
2206573..2208462
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AA seq
629 aa
AA seq
DB search
MIKILVVVPYLELQEQFDKVISQYDLDGFSISTTHFVGTDSKLIESLDADIAVARGITAS
AIASQKPSIHVVPIIMDSGDLFEALAKVKQRFDTCRIGIVINEELCGEDIISSLIEYPVS
VCRVHDQDDVQRAVFELKAKGCKVFVGGLTLCRICQNNGLEYEHVKTGNQAIIHSVEDAV
AAARSLDRVKTRGNLLLTLLNNAKDAMLAVNSSGVVIAGNRQAASLFACTPLEGKPIEAV
YKGIKWSQSLASVSSREELQAIGGQQILVSQQPIQVDSQPFGVLFTFQNAEAIRKSEHKI
RTELHRKGLVARYRFENIVTQNAHMLQLVEKAKRFSLVDSPILLLGETGTGKELFAQSIH
NASPRSHEPFVAVNCAALPEQLLESELFGYSEGAFTGASKGGKSGLFELAHKGTLFLDEI
GEIPLVLQAKLLRVLQEKEVRKIGADMVVPVDVRVISAANSNIIEKVKTGRFRLDLFYRI
SLLNIQLIPLRERKDDIGLLFTHFVRQYSLKNNHRVPAVNEEAFGELKRFFWPGNVRELR
NAAERLAILNSVEFVGREEIEQLDIGATSLYAEDVVPLQKRKKVEENVSSPEDQYRAFIA
SGLSRDAFARKIGVSRTTLWRRFSQFELE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttgattaagattttggttgtcgttccctatctagagcttcaggaacagtttgataaagta
atatctcagtacgatttagatggtttttccatctcaaccacccattttgtaggtaccgat
tcaaagttaatcgaaagccttgatgccgatattgccgtagccaggggtattaccgcttct
gcgattgcctcacagaaaccatccatccatgtagttcccataattatggatagcggggac
ctcttcgaggcgctggcaaaagtgaagcaacggtttgatacctgccgtatcggcatcgtc
attaatgaagaactatgcggtgaggacatcatatcttcacttatcgaatatcctgtttct
gtttgcagggtacatgaccaagatgatgtacagcgggctgtctttgagctgaaagccaaa
ggttgcaaggtcttcgtagggggacttaccctatgcaggatctgccaaaacaatggcctg
gaatatgaacacgtaaagacaggaaaccaagctatcatccactccgtggaagatgccgtt
gctgcagcacgctcgttggaccgtgtgaagacgaggggaaacctcctgcttacccttttg
aacaatgcaaaggatgcaatgcttgcagtaaatagctcaggcgttgtcattgccggaaac
cgtcaggctgcatccttgtttgcctgtactccgcttgaaggaaaaccaatcgaagccgta
tacaagggaatcaaatggtctcagtctcttgcctcagtatctagccgggaggaattgcag
gcaatcgggggccagcagattcttgtcagccagcagcctatccaggtagattcccaaccc
tttggggtactctttacattccagaatgcagaagctatccgcaaatccgaacacaagatc
agaactgaattgcaccgtaagggacttgtagccaggtatcggtttgagaatattgtcacc
caaaacgcccatatgctccagctggtagagaaagcaaagcgtttcagccttgtcgatagt
cctatcttattactcggtgagacggggaccggaaaggagctttttgcacaaagtatccat
aatgcatccccacgttcgcatgaaccttttgttgccgtgaactgtgctgctttgcccgaa
cagcttcttgaaagtgagttgtttgggtattcggaaggagccttcacaggggcgagcaag
ggagggaaaagcgggttgttcgaactggcccataagggaacccttttcctcgacgagatt
ggggagatcccgttggtccttcaggccaaactgttacgggtgctccaggagaaggaagtg
agaaagatcggggcagatatggtagtccccgttgatgtcagggttatcagtgccgcaaat
agcaatatcatagagaaggtcaagaccggcaggtttcgccttgatcttttctatcgtatc
agtctgttgaatattcaacttatccctcttcgtgaaaggaaagatgatatcggcctgctg
ttcacgcattttgtcaggcaatattccttgaaaaacaaccaccgtgttcctgcagtcaat
gaagaggcctttggtgagctcaagcggtttttctggccgggaaatgtccgtgaattgagg
aatgcagcagaacgacttgcaattctcaacagcgtggaatttgttgggagggaagaaatt
gagcaacttgatataggggctacaagcctctatgcagaagatgttgttccccttcagaaa
aggaagaaggttgaagagaacgtttcttcgcccgaagaccagtaccgagcttttattgcg
agcggtttaagcagggatgcctttgcacgaaagattggggtaagccgtacaacgctttgg
aggcgtttttcccaatttgaactagagtag
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