Sphaerochaeta pleomorpha: SpiGrapes_2615
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Entry
SpiGrapes_2615 CDS
T01673
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp03420
Nucleotide excision repair
sgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SpiGrapes_2615
03430 Mismatch repair
SpiGrapes_2615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_2615
Enzymes [BR:
sgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SpiGrapes_2615
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SpiGrapes_2615
MMR (mismatch excision repair)
Other MMR factors
SpiGrapes_2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEV30376
UniProt:
G8QUR8
LinkDB
All DBs
Position
2873153..2875495
Genome browser
AA seq
780 aa
AA seq
DB search
MGLIWKRFPWGVQMTEIENLLGQLNDNQKEAVLENSAPLLVLAGAGSGKTRVITTKIAYC
IEKLGIAPYKILAVTFTNKASKEMRERVGSLLPGKGYEQECNIRTFHAFGAWLLRRFGTE
IGLDSNFTIYDDDDSLSLLASCYPNHKKKELQPVMKRISFAKDRGLGCHDNLASLKADST
FPRMFEAYENKLHKVGNVDFADLITRSIELLDARPEVLAWVHRRFQVILVDEYQDSNIAQ
FELLRRLVGPTCFVCVVGDDDQSIYRFRGAEVQNILSFPEVYPGTKVVKLEQNYRSSQSI
LAVANTVISHNKGRHQKKLWTANPKGAKPNLLYVQDETDEAQRVGNILNRDKDFDSSAIL
YRTNAQSVAFETTFKRMHIPYKVVGALQFYDREEVKDVLALLFLLMNNKDEVNFKRMINK
PARGIGEGGIEKIFSYSGQVGDDLFITLEKAIASGILAGKAQSGARSFLSMFKEANRLLD
SEELVACVNFLIRESGLLDYYRKIDSQNSTGKVDNLEALVNALASYDSSRDGLALFLEQL
CLDPTTLGKEDPRDKPGVTLITMHNTKGLEFDRVFIAGLEDELFPGKASESDDDVEEERR
IFYVAVTRARKDLYLLSAKARRIWGKTSFQHPCRFLDEIGSELVSVQGMKPGTLSNGWEN
GGYQGFGMLDERRARSSSFGDGTKPRREPMGTRIPSGNNLIHQGFGDKAKTFEMKKSHEE
SNGESLFPLGQKVFSDQYGEGEVISVKKSGDREVIDVRFAGGRKATFISKFAALEKIGRD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgatttggaagcggttcccgtggggcgtgcaaatgactgagatcgagaatttg
cttgggcagttaaatgacaaccaaaaggaagcggtcctggaaaacagtgcacctttgttg
gtccttgccggcgcaggttcgggaaagaccagggttattactaccaagattgcctattgt
atagagaagcttggaattgccccctacaaaatccttgcagttacctttaccaataaagct
tccaaggaaatgcgcgagcgcgtaggctcgcttcttccggggaaagggtatgaacaggaa
tgcaacatacggaccttccatgccttcggagcctggttactccgccgctttggtacggaa
attggcctggattcaaatttcaccatctatgacgacgacgattccctgtcattgctagct
tcctgttacccaaaccacaaaaagaaagaactgcaaccggtaatgaaacgaatatccttt
gccaaggacagggggctgggctgtcatgacaacctcgcctctctcaaggcagacagtacc
tttccaaggatgtttgaagcctatgagaataaactccataaggtcggtaatgtagatttt
gcagaccttatcacacggagtattgaattgctcgatgcccgtccggaggtccttgcctgg
gtgcaccggcgtttccaggttattctggtcgatgaataccaagactcaaatattgcacag
tttgagttgctacgccgtcttgtcggccccacttgctttgtgtgtgtcgtcggtgacgac
gaccagagcatctatcggtttcggggggcagaggtccagaacatcctttcgtttcctgaa
gtatatccagggaccaaggtagttaaactcgaacagaactaccgttcttcccagagcatc
cttgccgtggcgaatacggtcatcagccataataagggaaggcaccagaaaaaactgtgg
acagcaaatccaaagggagcgaaacccaaccttctctatgtccaggatgaaaccgatgaa
gcccagcgggtagggaatattttgaaccgcgacaaagactttgacagcagtgcaatcttg
tatcggacaaatgcccagtcggttgccttcgagacaacattcaaacggatgcatatcccc
tataaagtggtaggggctttgcaattctatgaccgcgaagaagtcaaggatgtcctggct
ctgctctttttgctgatgaacaataaggacgaggtcaatttcaagcggatgatcaataaa
cctgccaggggaatcggggaagggggaatcgaaaaaatcttctcctattccggtcaagtt
ggtgatgatttgttcataacccttgaaaaggctattgcttccggcattcttgcgggaaag
gcccaaagcggtgcccgttcgttcctttccatgttcaaggaagccaaccgtttgcttgac
agcgaggaactggtagcatgtgtcaattttctgattcgtgaatcgggcttgcttgattat
taccgcaagattgacagccagaacagtaccggcaaagtggataaccttgaggcattggtc
aatgcacttgcctcctatgattcatccagggatggcttggccctgttccttgaacagttg
tgtctcgatcccactacgttgggtaaagaagacccaagggacaaacctggggtaaccttg
attaccatgcataataccaagggactcgagtttgaccgggtgttcattgcagggcttgaa
gacgaactctttcccggtaaggcaagtgaaagcgatgacgacgttgaagaagaacgcagg
attttctatgtcgcggtaaccagggcccggaaggatttgtacctgctgtcagccaaagca
cggagaatctggggaaaaaccagcttccagcatccctgcagattccttgacgagattggg
tctgaactagtctcggtacagggaatgaagccagggacactgtccaatggatgggaaaac
ggcggttaccagggattcggcatgcttgatgaacgcagggcacggtcctcgtctttcggt
gacgggacaaagccaaggcgcgaacctatgggaacgagaatcccttcaggcaacaatttg
atccaccagggtttcggcgacaaagcgaagaccttcgaaatgaaaaaaagccatgaagaa
tcgaatggcgagagtctgtttccccttggccagaaggtttttagcgaccagtatggagaa
ggtgaagtcatcagtgtaaagaagagcggggaccgtgaagtgatcgatgtgcgatttgcc
ggtggacggaaagcaacttttattagcaaattcgccgctcttgagaaaataggtcgtgac
tga
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