Sphaerochaeta pleomorpha: SpiGrapes_2748
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Entry
SpiGrapes_2748 CDS
T01673
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SpiGrapes_2748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgp03400
]
SpiGrapes_2748
Enzymes [BR:
sgp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
SpiGrapes_2748
DNA repair and recombination proteins [BR:
sgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SpiGrapes_2748
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SpiGrapes_2748
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SpiGrapes_2748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_C
ExoI_SH3
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEV30505
UniProt:
G8QVY1
LinkDB
All DBs
Position
complement(3007410..3008825)
Genome browser
AA seq
471 aa
AA seq
DB search
MNYQNKKATIFWYDLETFGLDSHYDRIAQFAGQRTDLELNPIGEPVVYYCRLSYDYLPDP
LSCLITGITPQEVNRKGMCESDLILRINDEFSVPNTTVAGFNNIRFDDEFIRNALYRNFL
DPYKREWENNCSRWDIIDLVRAAYDLRPEGIAWPPRKAENGNPTFKLTSLTEANTIEQEG
AHDALVDVMATISMARLIKEKQPRLYAYYYGLRKKAKVKEVVTTPFGEPVLYTASFFSTK
EGCSRLIVPLTPLPDNGNSILCFDLSKDVAPLFQATSENIMQVDGIFTLAVNKCPFVSKM
SVLTDKLAVKLGIDKELAMFRYNQICSQPRLLLLGREYKETFEPVKDADFLLYDGFFPDS
DHKRFELIRKAEPKDKLSLNLAFDDPRSSQLLFRHVCRNWVEVLDEPTMKKWRSFCANRI
LNPPGNIKVNWEFYRRKVDEKLASNETKAEEKLVLAKLKEYGSELEKVIFG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccaaaacaaaaaagccaccatcttctggtatgatctggaaactttcggactg
gacagtcactatgatagaattgcccagttcgcaggacaacggacagaccttgagctgaat
ccaataggagagccagtcgtctattattgccggctgagctacgattaccttcccgatccc
ctttcctgcctcattaccgggattaccccgcaggaagtaaaccgcaagggaatgtgcgaa
agcgatttgattcttcgtatcaacgatgaattctctgtcccgaacacgacggtggcaggg
tttaataatatccgcttcgatgatgagttcatcagaaatgccctgtaccggaatttcctc
gacccctataaacgggaatgggaaaacaattgcagcaggtgggatatcatcgatttggtc
agggctgcctacgacttgcgcccggagggcatcgcctggccacccagaaaagccgagaat
gggaaccccacgtttaaactaacctccctgaccgaagccaatacaatagaacaggaaggg
gcccacgacgcactggtcgatgtcatggcaaccatttccatggcacgactgatcaaggaa
aagcaacccagactctatgcctattactatggactccgcaagaaagcaaaggtaaaggaa
gtcgtaactaccccgtttggcgaaccggtactgtataccgcatcttttttcagcacgaag
gaaggatgttcccgcctcatcgtccccttgaccccgctacctgataatggaaacagcata
ctctgttttgatttgagcaaggatgtcgctccccttttccaggcaaccagcgaaaacatc
atgcaagtcgatggaatatttacccttgccgtaaacaaatgtccgtttgtaagcaaaatg
tcggtactgactgacaaactggctgtcaagctgggaatagacaaagagcttgcaatgttc
cgctataaccagatctgcagccaaccaagactactgctactcggacgagaatacaaagaa
accttcgaaccggtaaaagacgctgattttttgctctatgacggtttcttccccgatagc
gaccacaaacgtttcgaacttatccgcaaggccgaaccgaaagacaagctttccctcaat
cttgcttttgacgaccccaggagttcccaactgcttttcaggcatgtctgccgaaactgg
gtggaggttttggacgaacccactatgaaaaagtggagaagtttctgtgcaaaccgcatc
ctcaatccaccgggaaatatcaaggtgaactgggaattttaccgccgcaaggtagatgaa
aaacttgcgagcaacgaaacgaaagcagaagagaagcttgtacttgccaagttgaaagag
tatggctcagaactggaaaaagtgattttcggttag
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