Sphaerochaeta pleomorpha: SpiGrapes_3013
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Entry
SpiGrapes_3013 CDS
T01673
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp00061
Fatty acid biosynthesis
sgp00071
Fatty acid degradation
sgp01100
Metabolic pathways
sgp01212
Fatty acid metabolism
sgp02024
Quorum sensing
sgp04146
Peroxisome
Module
sgp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SpiGrapes_3013
00071 Fatty acid degradation
SpiGrapes_3013
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SpiGrapes_3013
09145 Cellular community - prokaryotes
02024 Quorum sensing
SpiGrapes_3013
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgp01004
]
SpiGrapes_3013
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgp04147
]
SpiGrapes_3013
Enzymes [BR:
sgp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SpiGrapes_3013
Lipid biosynthesis proteins [BR:
sgp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SpiGrapes_3013
Exosome [BR:
sgp04147
]
Exosomal proteins
Exosomal proteins of breast milk
SpiGrapes_3013
Exosomal proteins of breast cancer cells
SpiGrapes_3013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEV30763
UniProt:
G8QYB6
LinkDB
All DBs
Position
complement(3282564..3284273)
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AA seq
569 aa
AA seq
DB search
MKHSWEEIDEYRGILFPGKWPTILEMFMISLQQFPGNKCFTVFTPDRNTMTYTEVYDECS
RIGSYLQQQGLKKGDKVVINGKNSPQWALAYLSVFYAGGIVVPLDNQMHPDRVGTLSAFC
EASFFFGDSSVIDALSLDAPWVNNLKGVATLLGRSKHCPTLEELKPTKLYPSVPSSCEDD
AAILFTSGTTGNEKGAVLSHANIISDVYQACDGIFLELDDRDVLYALLPLHHSYCCTSVL
LESIRHGSECVFGHEIAVSKMIVDLTRGNVTIFMGIPLLYNKVLSGMMKQVKKKGVFVNS
LVHTMMFINGIMKKYLHLNPFRKTFNKLLLNKIGLDHNRICICGAGPLSPKVFKQYQQLG
LDFIQGYGLTETSPILTLNPISHFKIESVGMCFPLVDMKIGNPDEKGIGEILVKGPNVTR
GYYKDKAHTKELFTEDGYLKTGDLGCLDKENYLYLKGRAKNLIVTEGGKNVYPEEIEDLF
QLYTQVEQVLIRGYQEKKDVPAECIEAVIYPNMDFFKESKEDPQKNLEAVIKEVNQNLSG
YKKITKLTLIDKPMAMTSTQKIKRGKVIA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattcatgggaagagatagacgaatataggggaatacttttccccggcaaatgg
cctacgattctggaaatgtttatgatcagcttgcagcaattccctggaaataagtgtttt
acggtatttacgccagaccgaaacactatgacctataccgaggtgtatgacgaatgttcc
cgcattggatcatacttacagcaacagggtctaaaaaaaggggacaaggtcgtaatcaac
ggtaaaaattccccccaatgggccttggcctatctatctgtattctatgccggcggtatc
gttgtccccttggataaccagatgcatccggacagagtaggaaccctcagtgctttctgt
gaggcatctttcttttttggagacagctcggtaatcgacgcactgtccctagacgcaccc
tgggtaaataacctcaagggagttgcaacccttctcggcagaagcaaacattgcccgacc
ttagaagagttaaagccaaccaagctgtatccctctgtgccatcttcgtgcgaggatgat
gctgcaatcctttttaccagcggtactacgggaaatgaaaaaggtgccgtcctttcccac
gccaatatcatcagcgacgtataccaagcctgcgatgggattttccttgagttggatgac
cgggatgtcctgtatgccctgttgccactccaccatagctattgctgcacgtccgtcttg
cttgaaagcatccgtcatggctctgaatgtgtatttggacatgagattgccgtttccaag
atgatcgtcgacctgaccagagggaatgtcacaattttcatgggcattcccctgctatac
aataaagtactttcgggcatgatgaagcaagtcaagaaaaagggggtctttgtgaattcc
cttgttcatacgatgatgttcataaacggaatcatgaagaaatatctccatctaaatcca
tttcgaaagaccttcaacaagcttctgctcaataaaatcggcttggatcacaaccggatc
tgtatctgtggggcgggtcccctttctcccaaggtattcaaacaatatcagcaactggga
cttgattttatacaggggtatggccttacagaaaccagtccgatcctcacgctcaatccg
atcagccatttcaaaattgaatcagtcggcatgtgtttcccgctggtcgacatgaaaatc
ggaaacccagacgaaaaaggcattggcgaaattctcgtgaaaggtcccaacgttaccagg
ggctattataaagacaaggcacacaccaaggaactctttaccgaggatgggtacttgaaa
accggtgaccttggttgccttgacaaggaaaactacctctatctcaaaggaagggcaaaa
aaccttattgttactgagggcggaaagaatgtatatcccgaggaaatcgaggatctgttc
caactctatacccaggtagaacaggttcttatcaggggttatcaagagaaaaaggatgtt
cctgcagaatgcatcgaggccgtcatttatccgaatatggattttttcaaggaaagcaag
gaagatccacagaaaaacctcgaggctgtaatcaaagaagtaaaccaaaatctatccgga
tataaaaagattaccaagctgactctcatcgataaaccaatggctatgaccagtacccag
aaaatcaaacggggaaaagtcattgcctaa
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