Streptomyces griseus: SGR_1808
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Entry
SGR_1808 CDS
T00691
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgr
Streptomyces griseus
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgr03016
]
SGR_1808 (truB)
Enzymes [BR:
sgr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SGR_1808 (truB)
Transfer RNA biogenesis [BR:
sgr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SGR_1808 (truB)
Prokaryotic type
SGR_1808 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAG18637
Kitasato:
SGR1808
UniProt:
B1VYN2
LinkDB
All DBs
Position
complement(2148973..2149872)
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AA seq
299 aa
AA seq
DB search
MTEQTTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVQRAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEITSSTDASGVTRASIDAGVAALTGRIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTISSFRVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRAIARDLGAGLGVGGHLTALRRTRVGPYGLDAARTLDQHQEELTVMPVAEAAA
SAFPRWDVDEKRAKLLLNGVRLDMPAHPPGPVAVFGPDGAFLVLVEEEKGKAKSLAVFA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagaccaccacgccggacggccttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtcgtcgccaagatgcgcggcatcgcccgcacccggcgggtcggccac
gccggcacgctggaccccatggcgaccggcgtcctcgtactcggggtccagcgggccacc
aagctgctgggccacctcgccctgaccgagaaggagtacctcggcacgatccggctcggc
caggacaccgtcaccgacgacgccgagggcgagatcacctcgtccaccgacgcctccggc
gtgacccgcgcgtccatcgacgccggggtggccgcactcaccggccggatcatgcaggtc
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgcgcgggtgcgcggc
ggcgaggagttcgagatcccggcccgcccggtgaccatctcctccttccgcgtctacgac
gtccgcgaggcggtcgccgaggacggcacccccgtcctcgacctggtcgtctccgtcgtc
tgctcctcggggacctacatccgcgccatcgcccgcgacctcggcgccggactcggcgtc
ggcggccacctcaccgcgctgcgccgcacccgggtcggcccgtacggactggacgcggcc
cggaccctcgaccagcaccaggaggagctgaccgtgatgccggtcgccgaggcggcggcc
tccgcgttcccccggtgggacgtggacgagaagcgcgccaagctgctcctcaacggtgtg
cggctggacatgcccgcccatccgccggggccggtcgcggtcttcgggcccgacggggcg
ttcctcgtgctcgtcgaggaggagaagggcaaggccaagagcctcgccgtcttcgcctga
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integrated database retrieval system
