Streptomyces griseus: SGR_3858
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Entry
SGR_3858 CDS
T00691
Name
(GenBank) putative DNA polymerase III gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sgr
Streptomyces griseus
Pathway
sgr03030
DNA replication
sgr03430
Mismatch repair
sgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGR_3858
03430 Mismatch repair
SGR_3858
03440 Homologous recombination
SGR_3858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgr03032
]
SGR_3858
03400 DNA repair and recombination proteins [BR:
sgr03400
]
SGR_3858
Enzymes [BR:
sgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGR_3858
DNA replication proteins [BR:
sgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGR_3858
DNA repair and recombination proteins [BR:
sgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGR_3858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_30
AAA_14
zf-CXXC
AAA_16
AAA_5
AAA_18
AAA_19
nSTAND3
Mg_chelatase
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAG20687
Kitasato:
SGR3858
UniProt:
B1VR36
LinkDB
All DBs
Position
4519459..4521705
Genome browser
AA seq
748 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS
RYKIYIIDEAHMVTPAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRSYLADVCGRENSPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGAGDDGVTYAMA
TSLLGYTDGSLLDSIVDAFAAGDGAAAFEVVDRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAGEKGLIDAPADVVERMQAQASVFGAAELSRAADLVNDGLTEMRGATSPRLQVELIC
ARVLLPAAYDDERSLQARLDRLERGASAAAAAGFAAPPPAAPMGYAPGPDAHAPQTHAPQ
AHAPQAAGPDTARPAVRGEAPPAAPAYAPPAPQPAPAEAHPPAPQAPEPAQRPGSWPAAA
GTEQARRPGGWPTASVPGSGPAPAAPRPVAAAQAAPAAPAAPAAPEGGQSMAQGAAQVRN
MWPDILEAVKNRRRFTWILLSQNAQVAGFDGTTLRIGFLNAGARDNFAGSGSEEVLKQAL
LERFNAQWRIEAVIDTTGGGTPPGPGAGAARPAPQYQPAPAAPAAPVAYEPRPQHAAPQQ
SAPSPQYQPAPAPQQPPPSSAPSQDREGRPAPEASHSSYGAEPPRNVAPEDDTPEADDPD
LVDSALSGHELIVRELGATVVEEFTNEQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcccttgcgctgtaccgccgctaccgccccgagtcgttcgccgaggtcatcggt
caggagcatgtcactgacccgctccagcaggccctgcggaacaaccgggtcaatcacgcg
tacctgttcagcgggccgcgcggctgtgggaagacgaccagcgcgcgcatcctcgcccgc
tgtctgaactgcgagcaggggcccacgccgaccccgtgcggagagtgccagtcctgccag
gacctcgcgcgcaacgggccggggtccatcgatgtgatcgagatcgacgccgcctcgcac
ggtggtgtggacgacgcccgtgatctgcgggagaaggccttcttcgggcccgcctccagc
cgctacaagatctacatcatcgacgaggcgcacatggtcaccccggcgggcttcaacgcc
ctgctgaaggtggtcgaggagccgccggagcacctcaagttcatcttcgcgacgaccgag
cccgagaaggtcatcgggacgatccggtcgcgtacgcaccactacccgttccggctggtg
cccccggggaccttgcgcagctatctcgccgatgtatgcgggcgggagaacagccccgtc
gaggacggcgtccttccgctcgtcgtgcgcgccggggccgggtccgtgcgtgactcgatg
tccgtcatggaccagttgctggccggtgcgggcgacgacggtgtgacatacgccatggcc
acctcgctcctcgggtacaccgacggctcgctgctcgactcgatcgtcgacgccttcgcc
gccggcgacggggccgccgccttcgaggtcgtcgaccgggtcatcgagggcggcaacgat
ccacgccggttcgtggcggatctcctggagcggctgcgcgatctggtgatcctcgccgcc
gtgcccgacgccggggagaaggggctcatcgacgcgcccgccgatgtcgtcgagcgcatg
caggcccaggcctccgtcttcggcgccgccgagctcagccgcgccgccgacctggtcaac
gacgggctcaccgagatgcgcggcgccacctcgccccgcctccaggtggagctgatctgc
gcccgggtcctgctgcccgccgcctacgacgacgagcggtcgctgcaggcccgcctcgac
cggctggagcgcggggcctcggccgccgctgccgccgggttcgccgccccgccccccgcc
gccccgatggggtacgcaccgggccccgacgcgcacgccccccagacccacgccccccag
gcccacgccccccaggccgcgggcccggacacggcccgccccgccgtacggggcgaggcg
ccgcccgccgctcccgcctacgcgccgcccgccccgcagcccgctcccgccgaggcccac
ccgcctgccccgcaggcccccgagcccgcccagcggcccgggtcctggcccgccgcggcc
ggcacggaacaggcccgtcgccccggcggctggcccaccgcgtccgtccccggcagcggc
ccggcccccgccgccccgcgccccgtcgccgccgcccaggcggccccggcggcccccgcc
gctccggccgcgcccgagggcgggcagagcatggcccagggcgccgcccaggtgcggaac
atgtggccggacatcctggaggcggtcaagaaccgccggcgcttcacctggatcctgctc
agccagaacgcccaggtcgccgggttcgacgggacgacgctccggatcggcttcctcaac
gccggcgcccgcgacaacttcgccggcagcggcagcgaggaggtcctgaagcaggccctc
ctcgaacggttcaacgcccagtggcgcatcgaagcggtcatcgacaccaccggcggcggg
acgcccccggggcccggcgcgggtgccgcccgccccgccccgcagtaccagcccgccccg
gcggcccccgccgccccggtcgcgtacgagccccggccccagcacgcggccccgcagcag
tcggcgccctcgccgcagtaccagcccgcgccggcgccccagcagccgccgccctcctcc
gcaccgtcgcaggaccgcgagggccggcccgcgcccgaggcctcccacagctcctacggg
gccgagccgccgcgcaacgtcgcgcccgaggacgacacccccgaggccgacgatccggat
ctcgtcgactccgccctctccggccacgagctgatcgtccgcgagctgggcgccacggtc
gtcgaggagttcaccaacgagcagtga
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