Streptomyces griseus: SGR_4466
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Entry
SGR_4466 CDS
T00691
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sgr
Streptomyces griseus
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgr03021
]
SGR_4466
Transcription machinery [BR:
sgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGR_4466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_24
HTH_23
HTH_3
MarR
DUF7343
GerE
Sigma70_ECF
DUF1492
Motif
Other DBs
NCBI-ProteinID:
BAG21295
Kitasato:
SGR4466
UniProt:
B1VUR9
LinkDB
All DBs
Position
complement(5225880..5226851)
Genome browser
AA seq
323 aa
AA seq
DB search
MSPRLDEARTHNAPSACPQGPTHSDSPAASAVPGPRTGTTSTTRTTSDFSGAAGEGLEGL
PEIPPYAEVGALDARALSKTLFERLECLEEGTHEYSYVRNTLVELNLALVKFAAARFRSR
SEPMEDIVQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQ
ELRLDLAKAGDELSQQLDRAPTVAELSERLGISPEEVVEGMSASNAYTASSLDAKPEEDD
GEGALADRIGYEDHSLEGIEYVESLKPLIAALPARDRMILSLRFVSNMTQSEIGEELNIS
QMHVSRLLSRTLTKLRKGLTLEE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaagcgcgtacccacaacgcgccgtcggcatgtcctcaggga
ccgacccattccgactcccccgccgcgagcgccgttcccggcccgcgcaccggcacgacc
agcacgacccgcaccacctcagacttctccggcgcggccggcgagggcctcgaaggactt
cccgagatcccgccctacgccgaagtgggcgctctggacgccagggccctgtcgaagacg
ctcttcgagcggctggagtgcctcgaagagggcacccacgagtacagctacgtccgcaac
accctcgtcgagctcaacctcgcgctcgtcaagttcgccgccgcccggttccgctcccgc
agcgaacccatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgac
cggttcgaactgagccgcggcgtggagttccccacgttcgcgatgccgacgatcgtcggc
gagatcaagcgcttcttccgtgacaccagctggtccgtgcgcgtaccgcggcggctccag
gagctgcggctggacctggcgaaggccggcgacgagctctcccagcagctggaccgcgcg
cccaccgtggcggagctgtccgagcgcctcggcatcagcccggaggaggtcgtcgagggc
atgtcggcgagcaacgcgtacaccgcgagctcgctggacgccaagcccgaggaggacgac
ggcgagggcgccctcgcggaccgcatcggctacgaggaccacagcctcgaaggcatcgag
tacgtcgagtcgctgaagccgctgatcgccgcgctgcccgcccgggaccggatgatcctc
tcgctccgcttcgtcagcaacatgacccagtcggagatcggcgaggagctgaacatctcg
cagatgcacgtctcccggctgctctcccgcacgctgaccaagctccgcaagggtctgacc
ctggaggagtga
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integrated database retrieval system
