Streptomyces griseus: SGR_5440
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Entry
SGR_5440 CDS
T00691
Name
(GenBank) putative DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgr
Streptomyces griseus
Pathway
sgr03030
DNA replication
sgr03430
Mismatch repair
sgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGR_5440
03430 Mismatch repair
SGR_5440
03440 Homologous recombination
SGR_5440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgr03032
]
SGR_5440
03400 DNA repair and recombination proteins [BR:
sgr03400
]
SGR_5440
Enzymes [BR:
sgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGR_5440
DNA replication proteins [BR:
sgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGR_5440
DNA repair and recombination proteins [BR:
sgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGR_5440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
BAG22269
Kitasato:
SGR5440
UniProt:
B1W0K9
LinkDB
All DBs
Position
6396255..6399791
Genome browser
AA seq
1178 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFEAANEMGMTHIAMTDHGNLHGAYDFFHSAKKA
DVTPIIGIEAYVAPESRKHKRKVQWGQPHQKRDDVSGSGGYTHKTIWASNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGRYFLELMDHGIEIERRVRDGLLEIGKKLNIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTDEMYAVDSSDAWQEGCANTLLVAQQIDTTGMFEAKN
LMPKFEIPDGFTEVTWFQEEVRVGMARRFPNGVPDDRQKQVEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYSEAGEIRGMYESEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKS
NKGIDLEMLALPLDDPKTYELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKEVLGLTYGLIVYQEQVQKAAQIVAG
YSLGEADILRRVMGKKKPEELAKNFVLFEKGAKEKGFSDAAIKSLWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
LSNFAAQGDDVILFGLTAIRNVGQNVVDSIIRSRKAKGKYSTFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVQVKRKEAEGQFDLFGGGEEESGEPGFGLD
VEFSDIEWEKAYLLAQEREMLGLYVSDHPLFGLEHVLSDKADSSISQLMGGDYGDGAIVT
VGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRLD
KREDVPRLVAMEMQVPDISNAGTNAPVVLTIPTVKITPPMVTRLGEVLSHHRGDTEVRIR
LQGPRKTTVLRLDRHRVKADSALFGDLKVLLGPACLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcacgttcacacccagtactcgctgctggacggt
gcggcgcggctcaaggacatgttcgaagcggccaacgagatgggcatgacgcacatcgcg
atgaccgaccacggcaacctccacggcgcctacgacttcttccactcggcgaagaaggcg
gacgtcacgccgatcatcggcatcgaggcgtacgtcgcccccgagtcgcgcaaacacaag
cgcaaggtgcagtggggacagccgcaccagaagcgcgacgacgtgtccggttccggtggt
tacacccacaagaccatctgggcgtccaacaagacggggctgcacaacctcttccggctc
tcctccgacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggctcatcgcctccactggctgcccctccggcgaggtgcag
acccggctgcggctcggccagttcgacgaggcggtccaggcggcttccgactacaaggac
atcttcggcgagggcaggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacgggctgctggagatcggcaagaagctgaacatcccgccgctcgtcacc
aacgactcccactacacgtacgcccacgaggccaccgcccacgacgccctgctctgcatc
cagaccggcaagaacctctcggaccccgaccgcttccgcttcgacggcaccggctactac
ctgaagacgacggacgagatgtacgccgtcgactcctccgacgcctggcaggaggggtgc
gccaacaccctcctggtcgcccagcagatcgacaccaccggcatgttcgaggcgaagaac
ctcatgccgaagttcgagatcccggacggcttcacggaggtcacctggttccaggaggag
gtccgggtcggcatggcccgccgcttcccgaacggggtccccgacgaccggcagaagcag
gtcgagtacgagatggacatcatcatccagatggggttcccggggtacttcctggtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggcccgggccgtggctcc
gccgccggttcgatcgtggcgtacgcgatgggcatcaccgacctcgacccgatcgagcac
ggactgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtgatccggtacgtcaccgagaagtacggggcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgccatcaaggac
tcggcccgtgtgctgggctacccgtacgcgatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagagcgaaccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtgcggcagatgggcgtgcacgccgccggc
gtcatcatgtccagcgagcccatcgtcgaccacgcgcccgtctgggtccggcacaccgac
ggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccatcaagatggtgaagtcc
aacaagggcatcgacctggagatgctcgccctgccgctggacgaccccaagacctacgaa
ctgctctgccgcggtgacacgctcggcgtcttccagttcgacggcgggccgatgcgctcc
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacacgaactacgcggagcgcaagaacggccgc
caggagatcaccccgatccacccggagctggaggagcccctcaaggaggtcctcggcctc
acctacggcctgatcgtctaccaggagcaggtccagaaggccgcccagatcgtcgccggg
tactccctgggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcgtcctcttcgagaagggcgccaaggagaagggcttctccgacgcc
gcgatcaagtcgctgtgggacgtcctggtgccgttcgccggatacgcgttcaacaaggcg
cactcctcggcgtacggcctggtcacctactggaccgcctacctcaaggcgaactacccc
gccgagtacatggccgccctgctgacctcggtcaaggacgacaaggacaagtccgcggtc
tacctcaacgagtgccgccggatgggcatcaaggtgctcccgcccaacgtcaacgagtcg
ctctcgaacttcgccgcccagggcgacgacgtgatcctcttcggcctgaccgccatccgc
aacgtcggtcagaacgtcgtcgactcgatcatccggtcccgcaaggcgaaggggaagtac
agcaccttccccgacttcctcgacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gaatcgctgatcaaggccggggccttcgacgagatgggccacacccgcaagggcctcgtc
gcccaccacgagccgatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcgggggcggcgaggaggagagcggcgagccggggttcgggctcgac
gtggaattctccgacatcgagtgggagaaggcctacctgctcgcccaggagcgggagatg
ctcggcctgtacgtctccgaccacccgctgttcggcctggagcacgtgctgtccgacaag
gccgactcctcgatctcccagctcatgggcggggactacggcgacggcgccatcgtcacc
gtcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgggcc
atcgccaccgtcgaggacctggccggctccatcgagtgcatgttcttccccgccacctac
cagctggtctccacccagctcgtcgaggacaccgtcgtcttcgtcaagggacggctcgac
aagcgcgaggacgtgccccggctggtcgccatggagatgcaggtccccgacatctccaac
gccgggaccaacgcgcccgtcgtcctcaccatccccaccgtgaagatcaccccgcccatg
gtcacccggctcggcgaggtgctcagccaccaccggggcgacaccgaggtgcgcatcagg
ctccagggcccccgcaagaccaccgtcctgcggctcgaccggcaccgggtgaaggccgat
tcggccctcttcggcgacctgaaggtgctgctcggcccggcctgcctggccggctga
DBGET
integrated database retrieval system
