Streptomyces griseus: SGR_6823
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Entry
SGR_6823 CDS
T00691
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sgr
Streptomyces griseus
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgr03021
]
SGR_6823
Transcription machinery [BR:
sgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGR_6823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_Crp_2
Sigma70_r4_2
MarR_2
HTH_23
HTH_24
HTH_37
MarR
HTH_3
HTH_31
DUF7343
HTH_Tnp_4
Sigma70_ECF
KORA
Motif
Other DBs
NCBI-ProteinID:
BAG23652
Kitasato:
SGR6823
UniProt:
B1VN27
LinkDB
All DBs
Position
complement(8205384..8206256)
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AA seq
290 aa
AA seq
DB search
MSTPTEILVSQPTAADAAHAPELPQIDDPQKVAPKDARALSALFFERLQVLEEGTHAYQY
ARNTLIEMNLSLVHFAAKRFRNRGSGEMEDIVQVGTIGLIKAIDRFELSREVEFTSFAIP
YIVGEIKRFFRDSTWAVHVPRRLQELRVTLAKAKEELAGRLDRDPTVGELAAHLGLTDEE
VVEGLIASNGYTAGSLDLPIGTEQNSAETITYGDIKGDLDPAIELVENLHALAPLLEGLG
DRDREIVAMRFGQELTQAQIGERLGISQMHVSRLLNRLLTQLRKNMLAPN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacccacggagattctggtttcccagccgaccgctgccgatgccgcccatgct
ccggaactgccgcagatcgatgatccgcagaaggtcgcgccgaaggacgcacgggccctg
agcgccctgttcttcgagcggttgcaggttctggaggagggcacgcacgcgtaccagtac
gcgcggaacaccttgatcgagatgaacctctcgctggtgcacttcgccgcgaagcggttc
cgcaaccgcggcagcggcgagatggaggacatagtccaggtcggcacgatcgggctgatc
aaggcgatcgaccgcttcgaactcagccgcgaggtcgagttcacctccttcgcgatcccc
tacatcgtcggcgagatcaagcggttcttccgcgactccacctgggccgtccacgtaccc
cgtcggctccaggaactccgggtgacgctggccaaggcgaaggaggaactcgccggccgg
ctcgaccgggaccccaccgtcggcgaactggccgcgcacctgggcctcaccgacgaggag
gtcgtcgagggtctcatcgcgtccaacggctacaccgccggctccctcgacctgcccatc
ggcaccgagcagaacagcgccgagaccatcacctacggagacatcaagggcgacctcgac
cccgccatcgagctcgtcgagaacctccacgccctcgccccgctcctcgaaggactcggc
gaccgggaccgtgagatcgtcgccatgcgcttcgggcaggaattgacccaggcccagatc
ggcgaacggctcgggatctcccagatgcacgtctcccggctcctgaaccgtctgctcacg
caactccggaagaacatgctcgccccgaactga
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