Sporisorium graminicola: EX895_000207
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Entry
EX895_000207 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
sgra
Sporisorium graminicola
Pathway
sgra03082
ATP-dependent chromatin remodeling
sgra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EX895_000207
03083 Polycomb repressive complex
EX895_000207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_000207
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
EX895_000207
Histone modification proteins
HAT complexes
HATB complex
EX895_000207
HDAC complexes
Sin3A-HDAC complex
EX895_000207
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
EX895_000207
PRC2.2
EX895_000207
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
EX895_000207
Heterochromatin formation proteins
Other heterochromatin formation proteins
EX895_000207
Chromatin remodeling factors
NuRD complex
EX895_000207
NuRF complex
EX895_000207
NuRF complex (fruit fly)
EX895_000207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
TAF1C_beta-prop
NBCH_WD40
eIF2A
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
40723102
NCBI-ProteinID:
XP_029742194
UniProt:
A0A4V6EW49
LinkDB
All DBs
Position
SGRAM_1:491973..493274
Genome browser
AA seq
433 aa
AA seq
DB search
MDASNLIEDEAAIAQQKLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWFPDKESPAG
QSYTQHRLLLGTHTSGQDQNYLQIAQVQLPNTGADGPSNSAESRLDLKQYDEDKGEIGSY
SATTARLTIVQKINHDGEINRARYCPQNCDLIATRTVTGKTYVFDRTKHSNTPSADGVCR
PDIILEGQEKEGYGLSWSPLKQGHILAASEDTTVCHWDINNYTKGNNTLQPTATYTGHTS
IVEDVAWHNHHESLFGSVGDDRQLLIWDVREPASAPKYRVEAHTGEVNTLAFSPENENIL
VTGSSDKTVGVWDLRNLKVKLHSLESHTDEILSVCWSPHHPTVLASASADRRVNIWDLSK
IGQEQTPEDAEDGPPELIFVHGGHTSRPTDLGWSPHMEWALTSAAEDNIVMVWRPSKAVI
DTGNEEVNPEDLE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcaaatctcatcgaagatgaggctgccatcgcccagcagaagctctccaac
gaggagtacaagatctggaagaagaactcgcccttcctctacgacctcgtcgtgacgcat
gcgctcgaatggccttcgctcacctgccagtggttcccggacaaggagtcgcccgccggt
cagtcctatacccaacaccgactgctccttggcacccacacctcgggtcaagaccaaaac
tatcttcagattgcacaagttcagctgcccaacacgggtgctgatggcccctccaactcg
gcagagagtcgcttggatctcaaacagtacgacgaggacaagggggagattggaagctat
tcggccaccacggctcgtttgaccattgtgcaaaagatcaaccacgatggcgagatcaac
cgtgctcgctactgtcctcagaactgcgacctgattgcgactcgaaccgttaccggcaag
acgtacgtgttcgacagaacaaagcactccaacacaccttcggccgatggcgtttgtcga
cctgacatcatcctcgaagggcaggaaaaggaaggctacggtctctcgtggtcgcccttg
aagcagggccacattctcgccgcgagcgaagacaccaccgtctgccactgggacatcaac
aactacaccaagggcaacaacaccctccaacccaccgcgacctacacgggccacacgtcg
attgtcgaagacgtcgcatggcacaaccaccacgagtcgctcttcggttccgtgggcgat
gaccgccagctgctcatctgggacgtgcgcgaacctgcctcggcgcccaagtatcgcgtg
gaggcgcacacgggcgaagtcaacacgctcgctttcagccccgaaaacgaaaacatcctc
gtcactggatcctcggacaagaccgtcggtgtgtgggatctgcgcaacctcaaggtcaag
ctgcactcgctcgaatcgcacacggacgagatcctgtcagtgtgctggtcgccacaccac
ccgaccgtgcttgcgagtgcgtcggcggaccgcagggtgaatatctgggacctcagcaag
atcggccaagaacagacgcctgaggacgcagaggacggcccgcccgagttgatcttcgtg
cacggcggtcacacgagccgcccgacggatctcggttggagcccgcacatggagtgggcg
ctcacctcggctgctgaggacaacatcgtcatggtctggaggcccagcaaggctgtcatt
gacacggggaacgaggaggtcaacccggaggacctcgagtaa
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