Sporisorium graminicola: EX895_000215
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Entry
EX895_000215 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sgra
Sporisorium graminicola
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_000215
Enzymes [BR:
sgra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EX895_000215
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
90S particles
Helicases
EX895_000215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
nSTAND_NTPase5
Utp25_C
ParD_antitoxin
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
40723110
NCBI-ProteinID:
XP_029742202
UniProt:
A0A4U7L0M4
LinkDB
All DBs
Position
SGRAM_1:516940..518808
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AA seq
622 aa
AA seq
DB search
MDIFRTLAGGGARFDKKRFQNDLKIFGGAAADEPAGSTSSTTSSSKASAGKRKRKGTESI
ASANNEASTSNGAKVIVPDGLDFFGSAAKTKSTTSAVERQERLSKKDGKRKANTGSSDSE
DDVDEHDEGSDSEEERTDEAPVTKATLSTFLKANKIKLKGTDVPLPMASWSELETRFNVQ
PWLRTNLEKWGWGVPTAIQKGAMPVLLANRDLLAGAPTGSGKTLAFLLPLIHHLRAPSKK
EHFRAVIVSPTRELAQQIYDQLRRLSEGRNFRICVLTKTSDASAIANASSADPSKRKKFD
VLITTPLRLVHAVEKEEVDLSNVRHLVLDEADRLLEDGFLQQTDSILAACSHPHLRKALF
SATLPAGVEEMARTFMVDEYRVIVGTKDSATETIQQELQFVGSEDGKLHALRSLIQEGGL
KPPVLLFVQSIDRAKDLFHELVYDGLHVDVIHSDRPKLQREGVISAFKRGDVWVLICTEL
MARGIDFKGVQLVINYDFPQSVQSYIHRIGRTGRAGKQGRAITYFTKEDAVHLKTVVNVM
RQSGCDVPEWMVKLKNPGKNERKKLKQRAPERKEIRTSAASSMGRRQANKRKEMIAASKR
RKASDGKEQHKGRGEAKVQSEQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacatctttcgcaccttagcgggcggaggtgctcgcttcgacaagaagcgcttccag
aacgacctcaagatcttcggtggcgcagctgctgacgagccggcggggtctacgagcagt
acaacatcttccagcaaggcttctgcgggtaaacgaaaacgaaaagggacagagtcgatc
gcatctgccaacaacgaagcgtcgacgtcgaatggggcaaaagtgattgtcccggacggg
cttgatttcttcggttcagcggccaagacgaaatcgaccacttcggcggtggagcgtcaa
gagaggctcagcaagaaggatggcaagcggaaagcaaatactggatcttctgactcggag
gatgatgtagatgagcatgacgaaggctcggactcagaagaagagcgaacggacgaggcg
ccggtgacgaaagctacgctcagcaccttcctcaaagccaacaagatcaagttgaagggc
accgacgttccccttcccatggcgtcgtggtcggaactcgagacgcgattcaacgtgcaa
ccatggctgcgcaccaatctggaaaagtggggatggggtgtgcccaccgcgattcagaag
ggtgccatgcctgtgctgctcgccaaccgcgatctcctcgccggcgcacccacgggatcc
ggtaagacgcttgccttccttcttcctctcatccaccaccttcgcgcgccgtccaaaaag
gaacacttccgcgccgttatcgtttcacccacgcgcgaactcgctcaacagatctacgac
cagctgcgtcgacttagcgaagggcgtaacttccgcatctgcgtgctcaccaagacctcg
gatgcctctgcgatcgccaatgcgtcttccgccgatccgagcaaacgcaagaagttcgac
gtgctcatcacgacgccgctgcgacttgtgcatgcggtggagaaggaggaggtggatctg
agcaatgtgcgccatttggtgttggacgaagcagatcggttgttggaagatgggttcctg
cagcagacggactcgatcctggcggcgtgttcgcacccgcacttgcgcaaggcgctgttc
tctgccacgctgcccgcgggagtagaggagatggcgagaacgttcatggtcgacgaatac
cgcgtcatcgtgggcaccaaagactcggcgaccgaaacgatccagcaggagctgcaattc
gtcggatccgaagacggcaagctgcacgcgctgcgctcgctgatccaggaaggcgggctc
aagccacccgtgctgctgttcgtccagtcgatcgatcgcgccaaagatctattccacgag
ctggtctacgacgggttgcacgtcgacgtgatccactccgaccgacccaagctgcagcgc
gaaggcgtcatcagcgctttcaagcgcggagacgtgtgggtgcttatctgcaccgaactc
atggcacgcggtatcgacttcaagggcgtgcagctcgtgatcaactacgactttccgcag
tcggtgcagtcctacatccaccgcatcggtcgcacgggccgagcgggcaagcagggccga
gccatcacctacttcaccaaggaggacgccgtgcatctcaagaccgtggtcaacgtcatg
cgacagagcggctgcgacgtgccggagtggatggtgaaactgaagaacccaggcaagaac
gagaggaagaagctcaagcagagggcacccgagaggaaggagatccgcacgagcgcggct
agcagtatgggcaggaggcaggccaacaagcgcaaggagatgattgctgcgagcaagagg
aggaaggcgagcgatggcaaggagcagcacaaaggtcgaggcgaggccaaggttcagagc
gagcagtag
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integrated database retrieval system
